Information for 13-TTTGTGCACAAAG (Motif 22)

A G C T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C C G T A G T C A C T G A A T C G
Reverse Opposite:
T A G C A G C T A C G T A C G T T A C G A C G T A C T G A G T C C G T A G T A C C G T A G T C A C T G A
p-value:1e-7
log p-value:-1.682e+01
Information Content per bp:1.825
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.0 +/- 24.0bp
Average Position of motif in Background46.3 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTGCACAAAG-
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A G C T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C C G T A G T C A C T G A A T C G A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTGCACAAAG-
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A G C T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C C G T A G T C A C T G A A T C G A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTTGTGCACAAAG--
CAATTGCAAAAATAT
 A G C T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C C G T A G T C A C T G A A T C G A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TTTGTGCACAAAG
GGGCCGTGTGCAAAAA-
 A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C C G T A G T C A C T G A A T C G
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTGTGCACAAAG--
AAAATATGCATAATAAA
 A C G T A C G T A G C T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C C G T A G T C A C T G A A T C G A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTTGTGCACAAAG
-ATTTGCATAA--
 A G C T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C C G T A G T C A C T G A A T C G
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTTGTGCACAAAG
GTGCCGTGTGCAAA---
 A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C C G T A G T C A C T G A A T C G
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTGCACAAAG--
NSTGTTTRCWCAGBNNN
 A C G T A C G T A G C T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C C G T A G T C A C T G A A T C G A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTTGTGCACAAAG
TTCATTTGCATAT--
 A C G T A C G T A G C T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C C G T A G T C A C T G A A T C G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTTGTGCACAAAG
--ATTGCACAATA
 A G C T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C C G T A G T C A C T G A A T C G
A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A