Information for 16-AGCATTACTC (Motif 21)

C T G A A C T G A T G C C G T A A C G T A C G T C G T A G T A C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T T G C A C G T A A C G T A T C G A G T C A G C T
p-value:1e-8
log p-value:-1.900e+01
Information Content per bp:1.899
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif29.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets44.0 +/- 17.3bp
Average Position of motif in Background59.4 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGCATTACTC-
-TCATCAATCA
 C T G A A C T G A T G C C G T A A C G T A C G T C G T A G T A C A C G T A G T C A C G T
A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

NFE2/MA0841.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGCATTACTC---
--CATGACTCATC
 C T G A A C T G A T G C C G T A A C G T A C G T C G T A G T A C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C

JDP2/MA0655.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGCATTACTC--
---ATGACTCAT
 C T G A A C T G A T G C C G T A A C G T A C G T C G T A G T A C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T

PH0138.1_Pitx2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGCATTACTC---
TGAAGGGATTAATCATC
 A C G T A C G T A C G T A C G T C T G A A C T G A T G C C G T A A C G T A C G T C G T A G T A C A C G T A G T C A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGCATTACTC
NGGGATTA---
 A C G T C T G A A C T G A T G C C G T A A C G T A C G T C G T A G T A C A C G T A G T C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGCATTACTC---
-GGATGACTCATC
 C T G A A C T G A T G C C G T A A C G T A C G T C G T A G T A C A C G T A G T C A C G T A C G T A C G T
A C G T C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C

JUND/MA0491.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGCATTACTC---
--NATGAGTCACN
 C T G A A C T G A T G C C G T A A C G T A C G T C G T A G T A C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

PH0130.1_Otx2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGCATTACTC---
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T A C G T C T G A A C T G A T G C C G T A A C G T A C G T C G T A G T A C A C G T A G T C A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGCATTACTC---
-NNATGASTCATH
 C T G A A C T G A T G C C G T A A C G T A C G T C G T A G T A C A C G T A G T C A C G T A C G T A C G T
A C G T A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCATTACTC
NGGATTAA--
 C T G A A C T G A T G C C G T A A C G T A C G T C G T A G T A C A C G T A G T C
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T