Information for 12-TTTAGAATTCTAA (Motif 19)

A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C G T A C G T T A G C A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G C G T A C G T A A C G T A C G T G T A C A G C T C G T A C G T A C G T A
p-value:1e-8
log p-value:-1.920e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.5 +/- 12.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTTAGAATTCTAA-----
--TATAATTATAATATTC
 A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C G T A C G T T A G C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTTAGAATTCTAA-----
--TAAGATTATAATACGG
 A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C G T A C G T T A G C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTTAGAATTCTAA-----
--GCTAATTATAATTATC
 A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C G T A C G T T A G C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTTAGAATTCTAA-----
--TTTAATTATAATTAAG
 A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C G T A C G T T A G C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TTTAGAATTCTAA----
---AAAATTGTTATGAA
 A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C G T A C G T T A G C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTTAGAATTCTAA
ATTTGAATT----
 A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C G T A C G T T A G C A C G T C G T A C G T A
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTTAGAATTCTAA-
TGTATATATATACC
 A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C G T A C G T T A G C A C G T C G T A C G T A A C G T
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTTAGAATTCTAA-----
---AGNGTTCTAATGANN
 A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C G T A C G T T A G C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTTAGAATTCTAA----
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C G T A C G T T A G C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0172.1_Sox1_2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTTAGAATTCTAA---
-CTATAATTGTTAGCG
 A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C G T A C G T T A G C A C G T C G T A C G T A A C G T A C G T A C G T
A C G T G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G