Information for 8-CCAGCCCCGCAGG (Motif 6)

A G T C A G T C C T G A A C T G A G T C A G T C A G T C A G T C A C T G A T G C C G T A A C T G A T C G
Reverse Opposite:
A T G C A G T C A C G T A T C G G T A C C T A G A C T G A C T G A C T G A G T C A G C T A C T G A C T G
p-value:1e-8
log p-value:-2.012e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.7 +/- 27.1bp
Average Position of motif in Background52.3 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCAGCCCCGCAGG
TCCGCCCCCGCATT
A C G T A G T C A G T C C T G A A C T G A G T C A G T C A G T C A G T C A C T G A T G C C G T A A C T G A T C G
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCAGCCCCGCAGG-----
---DCHCAGCAGGRGGCC
A G T C A G T C C T G A A C T G A G T C A G T C A G T C A G T C A C T G A T G C C G T A A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

EGR1/MA0162.2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCAGCCCCGCAGG
CCCCCGCCCCCGCC--
A C G T A C G T A C G T A G T C A G T C C T G A A C T G A G T C A G T C A G T C A G T C A C T G A T G C C G T A A C T G A T C G
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCAGCCCCGCAGG--
--TGCCCTGAGGGCA
A G T C A G T C C T G A A C T G A G T C A G T C A G T C A G T C A C T G A T G C C G T A A C T G A T C G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCAGCCCCGCAGG
ATCCCCGCCCCTAAAA
A C G T A C G T A C G T A G T C A G T C C T G A A C T G A G T C A G T C A G T C A G T C A C T G A T G C C G T A A C T G A T C G
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCAGCCCCGCAGG---
-CCACACAGCAGGAGA
A G T C A G T C C T G A A C T G A G T C A G T C A G T C A G T C A C T G A T G C C G T A A C T G A T C G A C G T A C G T A C G T
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCAGCCCCGCAGG---
-CCACACAGCAGGAGA
A G T C A G T C C T G A A C T G A G T C A G T C A G T C A G T C A C T G A T G C C G T A A C T G A T C G A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCAGCCCCGCAGG
TCACCCCGCCCCAAATT
A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C T G A G T C A G T C A G T C A G T C A C T G A T G C C G T A A C T G A T C G
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCAGCCCCGCAGG---
----CACAGCAGGGGG
A G T C A G T C C T G A A C T G A G T C A G T C A G T C A G T C A C T G A T G C C G T A A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCAGCCCCGCAGG
-CRCCCACGCA--
A G T C A G T C C T G A A C T G A G T C A G T C A G T C A G T C A C T G A T G C C G T A A C T G A T C G
A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T