Information for 7-TGAAAGGTGRSTR (Motif 4)

A C G T A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A A T G C A C G T C T A G
Reverse Opposite:
A G T C C G T A A T C G A G C T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A G T C C G T A
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.899
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 24.7bp
Average Position of motif in Background49.9 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGAAAGGTGRSTR
GGATTGACAGGTCNTT-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A A T G C A C G T C T A G
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGAAAGGTGRSTR
ANGNAAAGGTCA---
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A A T G C A C G T C T A G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGAAAGGTGRSTR
NTATTGACAGGTNNTN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A A T G C A C G T C T A G
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGAAAGGTGRSTR-
---CAGGTAAGTAT
 A C G T A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A A T G C A C G T C T A G A C G T
A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

PH0102.1_Meis1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGAAAGGTGRSTR
NTATTGACAGCTNNTT-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A A T G C A C G T C T A G
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGAAAGGTGRSTR
GTATTGACAGGTNNTT-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A A T G C A C G T C T A G
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGAAAGGTGRSTR
NNATTGACAGGTGCTT-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A A T G C A C G T C T A G
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGAAAGGTGRSTR
GGAGAAAGGTGCGA-
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A A T G C A C G T C T A G
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGAAAGGTGRSTR
TGACAGGTGTCA-
 A C G T A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A A T G C A C G T C T A G
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGAAAGGTGRSTR
TGACAGGTGTCA-
 A C G T A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A A T G C A C G T C T A G
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T