Information for 4-CTCCCCCGTG (Motif 4)

A G T C A G C T G T A C A G T C A G T C A G T C A T G C A C T G G C A T A C T G
Reverse Opposite:
A G T C C G T A G T A C T A C G C T A G A C T G A C T G C A T G T C G A A C T G
p-value:1e-18
log p-value:-4.176e+01
Information Content per bp:1.833
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.05%
Number of Background Sequences with motif271.8
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets48.4 +/- 25.1bp
Average Position of motif in Background50.8 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0102.1_Zic2_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCCCGTG----
ACCCCCCCGGGGGGN
 A C G T A G T C A G C T G T A C A G T C A G T C A G T C A T G C A C T G G C A T A C T G A C G T A C G T A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CTCCCCCGTG
KGCCCTTCCCCA--
 A C G T A C G T A C G T A C G T A G T C A G C T G T A C A G T C A G T C A G T C A T G C A C T G G C A T A C T G
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTCCCCCGTG
-TCCCCA---
 A G T C A G C T G T A C A G T C A G T C A G T C A T G C A C T G G C A T A C T G
A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCCCGTG----
NCCCCCCCGGGGGGN
 A C G T A G T C A G C T G T A C A G T C A G T C A G T C A T G C A C T G G C A T A C T G A C G T A C G T A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CTCCCCCGTG--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T G T A C A G T C A G T C A G T C A T G C A C T G G C A T A C T G A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTCCCCCGTG
--NCCACGTG
 A G T C A G C T G T A C A G T C A G T C A G T C A T G C A C T G G C A T A C T G
A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTCCCCCGTG----
CCCCCCCGGGGGNN
 A G T C A G C T G T A C A G T C A G T C A G T C A T G C A C T G G C A T A C T G A C G T A C G T A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

Mycn/MA0104.3/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTCCCCCGTG
--GCCACGTG
 A G T C A G C T G T A C A G T C A G T C A G T C A T G C A C T G G C A T A C T G
A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTCCCCCGTG--
TCCGCCCCCGCATT
 A C G T A C G T A G T C A G C T G T A C A G T C A G T C A G T C A T G C A C T G G C A T A C T G A C G T A C G T
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTCCCCCGTG---
---CCACGTGGNN
 A G T C A G C T G T A C A G T C A G T C A G T C A T G C A C T G G C A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C