Information for 5-AGAGGGCGCT (Motif 7)

T G C A A C T G C T G A A T C G A C T G A T C G G T A C A T C G A T G C G A C T
Reverse Opposite:
C T G A A T C G A T G C A C T G A T G C A G T C A T G C A G C T A G T C A C G T
p-value:1e-13
log p-value:-2.998e+01
Information Content per bp:1.846
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.11%
Number of Background Sequences with motif231.2
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets48.1 +/- 23.5bp
Average Position of motif in Background49.7 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------AGAGGGCGCT----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G C T G A A T C G A C T G A T C G G T A C A T C G A T G C G A C T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AGAGGGCGCT---
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T T G C A A C T G C T G A A T C G A C T G A T C G G T A C A T C G A T G C G A C T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.65
Offset:-8
Orientation:forward strand
Alignment:--------AGAGGGCGCT-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G C T G A A T C G A C T G A T C G G T A C A T C G A T G C G A C T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGAGGGCGCT-----
TTGGGGGCGCCCCTAG
 A C G T T G C A A C T G C T G A A T C G A C T G A T C G G T A C A T C G A T G C G A C T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGAGGGCGCT----
ATAAGGGCGCGCGAT
 A C G T T G C A A C T G C T G A A T C G A C T G A T C G G T A C A T C G A T G C G A C T A C G T A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.63
Offset:-8
Orientation:reverse strand
Alignment:--------AGAGGGCGCT--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G C T G A A T C G A C T G A T C G G T A C A T C G A T G C G A C T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGAGGGCGCT
TGCGTGGGYG--
 A C G T A C G T T G C A A C T G C T G A A T C G A C T G A T C G G T A C A T C G A T G C G A C T
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGAGGGCGCT
NGCGTGGGCGGR
 A C G T A C G T T G C A A C T G C T G A A T C G A C T G A T C G G T A C A T C G A T G C G A C T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGAGGGCGCT
--AGCGCGCC
 T G C A A C T G C T G A A T C G A C T G A T C G G T A C A T C G A T G C G A C T
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAGGGCGCT----
ATAAAGGCGCGCGAT
 A C G T T G C A A C T G C T G A A T C G A C T G A T C G G T A C A T C G A T G C G A C T A C G T A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T