Information for 7-GGAAATTCCT (Motif 9)

A C T G C T A G C T G A C G T A G C T A C G A T A C G T A G T C A G T C G C A T
Reverse Opposite:
C G T A A C T G A C T G G T C A C G T A C G A T G C A T A G C T G A T C T G A C
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.826
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif125.7
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets46.8 +/- 30.6bp
Average Position of motif in Background48.3 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GGAAATTCCT
GGAAATTCCC
 A C T G C T A G C T G A C G T A G C T A C G A T A C G T A G T C A G T C G C A T
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GGAAATTCCT
GGAAATTCCC
 A C T G C T A G C T G A C G T A G C T A C G A T A C G T A G T C A G T C G C A T
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:GGAAATTCCT--
--GCATTCCAGN
 A C T G C T A G C T G A C G T A G C T A C G A T A C G T A G T C A G T C G C A T A C G T A C G T
A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

TEAD4/MA0809.1/Jaspar

Match Rank:4
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GGAAATTCCT-
-CACATTCCAT
 A C T G C T A G C T G A C G T A G C T A C G A T A C G T A G T C A G T C G C A T A C G T
A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GGAAATTCCT--
--RCATTCCWGG
 A C T G C T A G C T G A C G T A G C T A C G A T A C G T A G T C A G T C G C A T A C G T A C G T
A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGAAATTCCT
GGGGATTTCC-
 A C G T A C T G C T A G C T G A C G T A G C T A C G A T A C G T A G T C A G T C G C A T
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGAAATTCCT-
GGGAAATCCCCN
 A C G T A C T G C T A G C T G A C G T A G C T A C G A T A C G T A G T C A G T C G C A T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GGAAATTCCT--
--RCATTCCWGG
 A C T G C T A G C T G A C G T A G C T A C G A T A C G T A G T C A G T C G C A T A C G T A C G T
A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GGAAATTCCT-
-CACATTCCAT
 A C T G C T A G C T G A C G T A G C T A C G A T A C G T A G T C A G T C G C A T A C G T
A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GGAAATTCCT
--ACATTCCA
 A C T G C T A G C T G A C G T A G C T A C G A T A C G T A G T C A G T C G C A T
A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A