Information for 7-TGACTAATACGTT (Motif 9)

C G A T A C T G G T C A A G T C A C G T C G T A C G T A G A C T C G T A A T G C C T A G A C G T A C G T
Reverse Opposite:
C G T A G T C A A G T C A T C G A C G T C G T A C G A T A C G T C G T A A C T G A C G T T A G C C G T A
p-value:1e-12
log p-value:-2.915e+01
Information Content per bp:1.821
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.9 +/- 27.7bp
Average Position of motif in Background58.6 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGACTAATACGTT
NNNTTTNTAATACNG-
 A C G T A C G T A C G T C G A T A C T G G T C A A G T C A C G T C G T A C G T A G A C T C G T A A T G C C T A G A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGACTAATACGTT
ACCGTGACTAATTNN--
 A C G T A C G T A C G T A C G T C G A T A C T G G T C A A G T C A C G T C G T A C G T A G A C T C G T A A T G C C T A G A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGACTAATACGTT---
NNNATTAATCCGNTTNA
 A C G T C G A T A C T G G T C A A G T C A C G T C G T A C G T A G A C T C G T A A T G C C T A G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGACTAATACGTT---
NNNATTAATCCGNTTNA
 A C G T C G A T A C T G G T C A A G T C A C G T C G T A C G T A G A C T C G T A A T G C C T A G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0132.1_Pax6/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGACTAATACGTT---
TGATTAATTAATTGAC
 C G A T A C T G G T C A A G T C A C G T C G T A C G T A G A C T C G T A A T G C C T A G A C G T A C G T A C G T A C G T A C G T
A G C T C T A G T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T A C G T T A C G C G T A G T A C

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGACTAATACGTT
DATGASTCATNN---
 A C G T A C G T C G A T A C T G G T C A A G T C A C G T C G T A C G T A G A C T C G T A A T G C C T A G A C G T A C G T
C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C A C G T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGACTAATACGTT--
AATCGTTAATCCCTTTA
 A C G T A C G T C G A T A C T G G T C A A G T C A C G T C G T A C G T A G A C T C G T A A T G C C T A G A C G T A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

GSC/MA0648.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGACTAATACGTT
--GCTAATCCCC-
 C G A T A C T G G T C A A G T C A C G T C G T A C G T A G A C T C G T A A T G C C T A G A C G T A C G T
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGACTAATACGTT
GTTAACTAGN-----
 A C G T A C G T C G A T A C T G G T C A A G T C A C G T C G T A C G T A G A C T C G T A A T G C C T A G A C G T A C G T
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGACTAATACGTT
ATGASTCATH----
 A C G T C G A T A C T G G T C A A G T C A C G T C G T A C G T A G A C T C G T A A T G C C T A G A C G T A C G T
T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A A C G T A C G T A C G T A C G T