Information for 14-GATAATACAT (Motif 22)

A C T G G T C A A C G T C T G A C T G A A C G T G T C A G T A C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T C G T A G A C T G A C T G T C A C A G T A G T C
p-value:1e-8
log p-value:-1.846e+01
Information Content per bp:1.805
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif32.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets43.1 +/- 26.0bp
Average Position of motif in Background56.9 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GATAATACAT
GAATATTCAT
 A C T G G T C A A C G T C T G A C T G A A C G T G T C A G T A C C G T A A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GATAATACAT-
NTTGATACATT
 A C T G G T C A A C G T C T G A C T G A A C G T G T C A G T A C C G T A A C G T A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GATAATACAT-
TAATGATGATCACTA
 A C G T A C G T A C G T A C G T A C T G G T C A A C G T C T G A C T G A A C G T G T C A G T A C C G T A A C G T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

CUX1/MA0754.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GATAATACAT--
--TAATCGATAA
 A C T G G T C A A C G T C T G A C T G A A C G T G T C A G T A C C G T A A C G T A C G T A C G T
A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GATAATACAT
GHATATKCAT
 A C T G G T C A A C G T C T G A C T G A A C G T G T C A G T A C C G T A A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

CUX2/MA0755.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GATAATACAT--
--TAATCGATAA
 A C T G G T C A A C G T C T G A C T G A A C G T G T C A G T A C C G T A A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GATAATACAT
TGAATTATGCAT
 A C G T A C G T A C T G G T C A A C G T C T G A C T G A A C G T G T C A G T A C C G T A A C G T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GATAATACAT--
ATGAATWATTCATGA
 A C G T A C G T A C G T A C T G G T C A A C G T C T G A C T G A A C G T G T C A G T A C C G T A A C G T A C G T A C G T
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GATAATACAT--
ATGCATWATGCATRW
 A C G T A C G T A C G T A C T G G T C A A C G T C T G A C T G A A C G T G T C A G T A C C G T A A C G T A C G T A C G T
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

GATA5/MA0766.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GATAATACAT
AGATAAGA---
 A C G T A C T G G T C A A C G T C T G A C T G A A C G T G T C A G T A C C G T A A C G T
G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T