Information for 13-GTCTCTKTTTTCT (Motif 15)

A C T G A C G T A T G C A C G T A G T C A G C T A C G T A C G T A C G T A G C T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G G T C A C T G A C G T A G T C A G T C A C T G A A C T G C G T A A T C G C G T A G T A C
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.837
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif14.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets59.1 +/- 24.8bp
Average Position of motif in Background63.5 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTCTCTKTTTTCT
GKMTCADRTTWC-
 A C T G A C G T A T G C A C G T A G T C A G C T A C G T A C G T A C G T A G C T A C G T A G T C A C G T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTCTCTKTTTTCT
GKVTCADRTTWC-
 A C T G A C G T A T G C A C G T A G T C A G C T A C G T A C G T A C G T A G C T A C G T A G T C A C G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTCTCTKTTTTCT
CAGTTTCGNTTCTN-
 A C G T A C G T A C T G A C G T A T G C A C G T A G T C A G C T A C G T A C G T A C G T A G C T A C G T A G T C A C G T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTCTCTKTTTTCT
TCAGTTTCATTTTCC-
 A C G T A C G T A C G T A C T G A C G T A T G C A C G T A G T C A G C T A C G T A C G T A C G T A G C T A C G T A G T C A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTCTCTKTTTTCT----
--CTTTGTTTACTTTTN
 A C T G A C G T A T G C A C G T A G T C A G C T A C G T A C G T A C G T A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTCTCTKTTTTCT
AGTTTCAKTTTC--
 A C G T A C T G A C G T A T G C A C G T A G T C A G C T A C G T A C G T A C G T A G C T A C G T A G T C A C G T
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTCTCTKTTTTCT-
---TNTGTTTACTT
 A C T G A C G T A T G C A C G T A G T C A G C T A C G T A C G T A C G T A G C T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GTCTCTKTTTTCT----
---TTTTTTTTCNNGTN
 A C T G A C G T A T G C A C G T A G T C A G C T A C G T A C G T A C G T A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTCTCTKTTTTCT----
-ANTCCTTTGTCTNNNN
 A C T G A C G T A T G C A C G T A G T C A G C T A C G T A C G T A C G T A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTCTCTKTTTTCT
AGTTTCAGTTTC--
 A C G T A C T G A C G T A T G C A C G T A G T C A G C T A C G T A C G T A C G T A G C T A C G T A G T C A C G T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T