Information for 12-CACTTDTAAAACA (Motif 12)

A T G C C G T A A G T C A C G T C G A T C A G T C A G T C G T A C G T A C G T A C G T A A G T C C T G A
Reverse Opposite:
A G C T A C T G A C G T A C G T C G A T C G A T G C T A G C T A C G T A C G T A C T A G A C G T A T C G
p-value:1e-10
log p-value:-2.368e+01
Information Content per bp:1.843
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.6 +/- 27.6bp
Average Position of motif in Background46.1 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CACTTDTAAAACA
-NCYAATAAAA--
 A T G C C G T A A G T C A C G T C G A T C A G T C A G T C G T A C G T A C G T A C G T A A G T C C T G A
A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CACTTDTAAAACA
-CCYMATAAAA--
 A T G C C G T A A G T C A C G T C G A T C A G T C A G T C G T A C G T A C G T A C G T A A G T C C T G A
A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CACTTDTAAAACA
-GCTCGTAAAAA-
 A T G C C G T A A G T C A C G T C G A T C A G T C A G T C G T A C G T A C G T A C G T A A G T C C T G A
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CACTTDTAAAACA
--CCAATAAAAA-
 A T G C C G T A A G T C A C G T C G A T C A G T C A G T C G T A C G T A C G T A C G T A A G T C C T G A
A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACTTDTAAAACA
ACCACTTGAA-----
 A C G T A C G T A T G C C G T A A G T C A C G T C G A T C A G T C A G T C G T A C G T A C G T A C G T A A G T C C T G A
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACTTDTAAAACA
ACCACTTAA------
 A C G T A C G T A T G C C G T A A G T C A C G T C G A T C A G T C A G T C G T A C G T A C G T A C G T A A G T C C T G A
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CACTTDTAAAACA
--CCAATAAAAA-
 A T G C C G T A A G T C A C G T C G A T C A G T C A G T C G T A C G T A C G T A C G T A A G T C C T G A
A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACTTDTAAAACA
CCACTTGAA-----
 A C G T A T G C C G T A A G T C A C G T C G A T C A G T C A G T C G T A C G T A C G T A C G T A A G T C C T G A
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACTTDTAAAACA--
CTACCAATAAAATTCT
 A C G T A T G C C G T A A G T C A C G T C G A T C A G T C A G T C G T A C G T A C G T A C G T A A G T C C T G A A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CACTTDTAAAACA
--CCAATAAAAC-
 A T G C C G T A A G T C A C G T C G A T C A G T C A G T C G T A C G T A C G T A C G T A A G T C C T G A
A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T