Information for 5-NBAGCGCCCTCNN (Motif 5)

T G C A A T G C G T C A T A C G A G T C C T A G A T G C T A G C A T G C G C A T A T G C G A C T T C A G
Reverse Opposite:
A G T C C T G A T A C G C G T A T A C G A T C G T A C G G A T C T C A G A T G C C A G T T A C G A C G T
p-value:1e-14
log p-value:-3.440e+01
Information Content per bp:1.370
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.6 +/- 15.8bp
Average Position of motif in Background43.5 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-NBAGCGCCCTCNN---
GGTCCCGCCCCCTTCTC
 A C G T T G C A A T G C G T C A T A C G A G T C C T A G A T G C T A G C A T G C G C A T A T G C G A C T T C A G A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--NBAGCGCCCTCNN-----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T T G C A A T G C G T C A T A C G A G T C C T A G A T G C T A G C A T G C G C A T A T G C G A C T T C A G A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--NBAGCGCCCTCNN
ANCGCGCGCCCTTNN
 A C G T A C G T T G C A A T G C G T C A T A C G A G T C C T A G A T G C T A G C A T G C G C A T A T G C G A C T T C A G
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---NBAGCGCCCTCNN
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T T G C A A T G C G T C A T A C G A G T C C T A G A T G C T A G C A T G C G C A T A T G C G A C T T C A G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:NBAGCGCCCTCNN
AGCGCGCC-----
 T G C A A T G C G T C A T A C G A G T C C T A G A T G C T A G C A T G C G C A T A T G C G A C T T C A G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:NBAGCGCCCTCNN
GCCMCGCCCMCY-
 T G C A A T G C G T C A T A C G A G T C C T A G A T G C T A G C A T G C G C A T A T G C G A C T T C A G
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--NBAGCGCCCTCNN
NTCGCGCGCCTTNNN
 A C G T A C G T T G C A A T G C G T C A T A C G A G T C C T A G A T G C T A G C A T G C G C A T A T G C G A C T T C A G
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:NBAGCGCCCTCNN-------
-TAGCGCCCCCTGGTGGCCA
 T G C A A T G C G T C A T A C G A G T C C T A G A T G C T A G C A T G C G C A T A T G C G A C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--NBAGCGCCCTCNN
RGTTAGTGCCCY---
 A C G T A C G T T G C A A T G C G T C A T A C G A G T C C T A G A T G C T A G C A T G C G C A T A T G C G A C T T C A G
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:NBAGCGCCCTCNN-------
ANAGTGCCACCTGGTGGCCA
 T G C A A T G C G T C A T A C G A G T C C T A G A T G C T A G C A T G C G C A T A T G C G A C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A