Information for 11-CTGTCCCTAAGGC (Motif 12)

T A G C G A C T A C T G C A G T A G T C A G T C A T G C C G A T T C G A C G T A A T C G C T A G G T A C
Reverse Opposite:
C A T G A G T C A T G C C G A T A G C T C G T A A T C G A C T G A C T G G C T A T G A C C G T A A C T G
p-value:1e-7
log p-value:-1.768e+01
Information Content per bp:1.676
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif114.3
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets64.0 +/- 19.9bp
Average Position of motif in Background50.0 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTGTCCCTAAGGC
GSCTGTCACTCA---
 A C G T A C G T T A G C G A C T A C T G C A G T A G T C A G T C A T G C C G A T T C G A C G T A A T C G C T A G G T A C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGTCCCTAAGGC
-ATGCCCTGAGGC
 T A G C G A C T A C T G C A G T A G T C A G T C A T G C C G A T T C G A C G T A A T C G C T A G G T A C
A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGTCCCTAAGGC
-WTGSCCTSAGGS
 T A G C G A C T A C T G C A G T A G T C A G T C A T G C C G A T T C G A C G T A A T C G C T A G G T A C
A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGTCCCTAAGGC
NCTGTCAATCAN--
 A C G T T A G C G A C T A C T G C A G T A G T C A G T C A T G C C G A T T C G A C G T A A T C G C T A G G T A C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGTCCCTAAGGC
CTGTTGCTAGGS-
 T A G C G A C T A C T G C A G T A G T C A G T C A T G C C G A T T C G A C G T A A T C G C T A G G T A C
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTGTCCCTAAGGC
SCTGTCAVTCAV--
 A C G T T A G C G A C T A C T G C A G T A G T C A G T C A T G C C G A T T C G A C G T A A T C G C T A G G T A C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTGTCCCTAAGGC-
---AGCCTCAGGCA
 T A G C G A C T A C T G C A G T A G T C A G T C A T G C C G A T T C G A C G T A A T C G C T A G G T A C A C G T
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTGTCCCTAAGGC-
---NGCCTNAGGCN
 T A G C G A C T A C T G C A G T A G T C A G T C A T G C C G A T T C G A C G T A A T C G C T A G G T A C A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGTCCCTAAGGC---
-ATTGCCTGAGGCAAT
 T A G C G A C T A C T G C A G T A G T C A G T C A T G C C G A T T C G A C G T A A T C G C T A G G T A C A C G T A C G T A C G T
A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGTCCCTAAGGC---
-ATTGCCTGAGGCGAA
 T A G C G A C T A C T G C A G T A G T C A G T C A T G C C G A T T C G A C G T A A T C G C T A G G T A C A C G T A C G T A C G T
A C G T C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A