Information for 8-ATTCTTGTGT (Motif 9)

C T G A A C G T A G C T A T G C G C A T A C G T A C T G C G A T C T A G A G C T
Reverse Opposite:
T C G A G A T C C G T A T G A C G T C A C G T A A T C G C T G A C G T A G A C T
p-value:1e-10
log p-value:-2.353e+01
Information Content per bp:1.826
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif116.4
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets45.2 +/- 28.2bp
Average Position of motif in Background50.0 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0067.1_Sox18_1/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATTCTTGTGT--
TTCAATTGTTCTAAAA
 A C G T A C G T A C G T A C G T C T G A A C G T A G C T A T G C G C A T A C G T A C T G C G A T C T A G A G C T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATTCTTGTGT--
TAATTGTTCTAAAC
 A C G T A C G T C T G A A C G T A G C T A T G C G C A T A C G T A C T G C G A T C T A G A G C T A C G T A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATTCTTGTGT------
NNNNTTGTGTGCTTNN
 C T G A A C G T A G C T A T G C G C A T A C G T A C T G C G A T C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0074.1_Sox8_1/Jaspar

Match Rank:4
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ATTCTTGTGT-
GTATCTATTGTTCTTTA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A G C T A T G C G C A T A C G T A C T G C G A T C T A G A G C T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATTCTTGTGT
ATTGTTA---
 C T G A A C G T A G C T A T G C G C A T A C G T A C T G C G A T C T A G A G C T
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATTCTTGTGT---
NNNCCATTGTGTNAN
 A C G T A C G T C T G A A C G T A G C T A T G C G C A T A C G T A C T G C G A T C T A G A G C T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0093.1_Zfp105_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATTCTTGTGT---
NTNTTGTTGTTTGTN
 A C G T A C G T C T G A A C G T A G C T A T G C G C A T A C G T A C T G C G A T C T A G A G C T A C G T A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATTCTTGTGT---
GTNTTGTTGTGANNT
 A C G T A C G T C T G A A C G T A G C T A T G C G C A T A C G T A C T G C G A T C T A G A G C T A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATTCTTGTGT
ACTTCCTGTT-
 A C G T C T G A A C G T A G C T A T G C G C A T A C G T A C T G C G A T C T A G A G C T
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATTCTTGTGT
ATTGTT----
 C T G A A C G T A G C T A T G C G C A T A C G T A C T G C G A T C T A G A G C T
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T