Information for 6-CGTTTGTTTA (Motif 3)

A G T C A T C G A G C T G C A T C G A T T A C G G A C T A G C T A C G T C T G A
Reverse Opposite:
G A C T T C G A T C G A C T G A A T G C G C T A C G T A T C G A T A G C T C A G
p-value:1e-16
log p-value:-3.698e+01
Information Content per bp:1.665
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif7.44%
Number of Background Sequences with motif991.7
Percentage of Background Sequences with motif2.11%
Average Position of motif in Targets49.6 +/- 26.7bp
Average Position of motif in Background49.4 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--CGTTTGTTTA----
NNNNTTTGTTTACNNT
 A C G T A C G T A G T C A T C G A G C T G C A T C G A T T A C G G A C T A G C T A C G T C T G A A C G T A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Foxj3/MA0851.1/Jaspar

Match Rank:2
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CGTTTGTTTA------
NNNTTTGTTTACNTTNN
 A C G T A G T C A T C G A G C T G C A T C G A T T A C G G A C T A G C T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:3
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CGTTTGTTTA------
NNNTTTGTTTACNTTNN
 A C G T A G T C A T C G A G C T G C A T C G A T T A C G G A C T A G C T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

Foxj2/MA0614.1/Jaspar

Match Rank:4
Score:0.86
Offset:3
Orientation:reverse strand
Alignment:CGTTTGTTTA-
---TTGTTTAC
 A G T C A T C G A G C T G C A T C G A T T A C G G A C T A G C T A C G T C T G A A C G T
A C G T A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C

FOXG1/MA0613.1/Jaspar

Match Rank:5
Score:0.85
Offset:3
Orientation:reverse strand
Alignment:CGTTTGTTTA-
---TTGTTTAC
 A G T C A T C G A G C T G C A T C G A T T A C G G A C T A G C T A C G T C T G A A C G T
A C G T A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:CGTTTGTTTA------
-CTTTGTTTACTTTTN
 A G T C A T C G A G C T G C A T C G A T T A C G G A C T A G C T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Foxk1/MA0852.1/Jaspar

Match Rank:7
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-CGTTTGTTTA------
NNNTTTGTTTACATTTN
 A C G T A G T C A T C G A G C T G C A T C G A T T A C G G A C T A G C T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:8
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-CGTTTGTTTA------
NNNTTTGTTTACATTTN
 A C G T A G T C A T C G A G C T G C A T C G A T T A C G G A C T A G C T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.84
Offset:2
Orientation:reverse strand
Alignment:CGTTTGTTTA---
--TNTGTTTACTT
 A G T C A T C G A G C T G C A T C G A T T A C G G A C T A G C T A C G T C T G A A C G T A C G T A C G T
A C G T A C G T G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T

PB0019.1_Foxl1_1/Jaspar

Match Rank:10
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CGTTTGTTTA------
NNNTTTGTTTACATTTN
 A C G T A G T C A T C G A G C T G C A T C G A T T A C G G A C T A G C T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A