Information for 3-AACTACAWCTCCCAGA (Motif 3)

C T G A C T G A T A G C G A C T G C T A G T A C T C G A G C T A G A T C A G C T A T G C A G T C A G T C C T G A C T A G T G C A
Reverse Opposite:
A C G T G A T C A G C T A C T G T A C G A T C G C T G A C T A G C G A T A G C T A C T G C A G T C T G A A T C G G A C T G A C T
p-value:1e-29
log p-value:-6.805e+01
Information Content per bp:1.686
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.72%
Number of Background Sequences with motif89.3
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets50.1 +/- 21.1bp
Average Position of motif in Background44.0 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:AACTACAWCTCCCAGA----
RACTACAACTCCCAGVAKGC
 C T G A C T G A T A G C G A C T G C T A G T A C T C G A G C T A G A T C A G C T A T G C A G T C A G T C C T G A C T A G T G C A A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.89
Offset:0
Orientation:forward strand
Alignment:AACTACAWCTCCCAGA----
AACTACAATTCCCAGAATGC
 C T G A C T G A T A G C G A C T G C T A G T A C T C G A G C T A G A T C A G C T A T G C A G T C A G T C C T G A C T A G T G C A A C G T A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.88
Offset:1
Orientation:forward strand
Alignment:AACTACAWCTCCCAGA
-ACTACAATTCCC---
 C T G A C T G A T A G C G A C T G C T A G T A C T C G A G C T A G A T C A G C T A T G C A G T C A G T C C T G A C T A G T G C A
A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.62
Offset:6
Orientation:forward strand
Alignment:AACTACAWCTCCCAGA-----
------ATTTCCCAGVAKSCY
 C T G A C T G A T A G C G A C T G C T A G T A C T C G A G C T A G A T C A G C T A T G C A G T C A G T C C T G A C T A G T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.59
Offset:6
Orientation:forward strand
Alignment:AACTACAWCTCCCAGA
------HTTTCCCASG
 C T G A C T G A T A G C G A C T G C T A G T A C T C G A G C T A G A T C A G C T A T G C A G T C A G T C C T G A C T A G T G C A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:AACTACAWCTCCCAGA--
--------TGCCCAGNHW
 C T G A C T G A T A G C G A C T G C T A G T A C T C G A G C T A G A T C A G C T A T G C A G T C A G T C C T G A C T A G T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:AACTACAWCTCCCAGA--
-------TTTCCCAGAAN
 C T G A C T G A T A G C G A C T G C T A G T A C T C G A G C T A G A T C A G C T A T G C A G T C A G T C C T G A C T A G T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AACTACAWCTCCCAGA
AAACCACANN-------
 A C G T C T G A C T G A T A G C G A C T G C T A G T A C T C G A G C T A G A T C A G C T A T G C A G T C A G T C C T G A C T A G T G C A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:AACTACAWCTCCCAGA--------
---------TCCCAGMCRAGCCCC
 C T G A C T G A T A G C G A C T G C T A G T A C T C G A G C T A G A T C A G C T A T G C A G T C A G T C C T G A C T A G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AACTACAWCTCCCAGA
NWAACCACADNN------
 A C G T A C G T C T G A C T G A T A G C G A C T G C T A G T A C T C G A G C T A G A T C A G C T A T G C A G T C A G T C C T G A C T A G T G C A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T