Information for 14-CACAATTTGC (Motif 22)

A G T C G C T A A T G C C G T A C G T A C G A T C G A T C A G T T C A G A G T C
Reverse Opposite:
C T A G A G T C G C T A C G T A C G T A C G A T C G A T A T C G C A G T A C T G
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.828
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif108.5
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets38.3 +/- 22.2bp
Average Position of motif in Background53.5 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----CACAATTTGC
NNCNNAACAATTNT-
 A C G T A C G T A C G T A C G T A C G T A G T C G C T A A T G C C G T A C G T A C G A T C G A T C A G T T C A G A G T C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:2
Score:0.68
Offset:-10
Orientation:reverse strand
Alignment:----------CACAATTTGC--
NNCNNNCNCANACAATTAGNAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C T A A T G C C G T A C G T A C G A T C G A T C A G T T C A G A G T C A C G T A C G T
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CACAATTTGC
GACAATGNN-
 A G T C G C T A A T G C C G T A C G T A C G A T C G A T C A G T T C A G A G T C
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CACAATTTGC--
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T A G T C G C T A A T G C C G T A C G T A C G A T C G A T C A G T T C A G A G T C A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0173.1_Sox21_2/Jaspar

Match Rank:5
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------CACAATTTGC-
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C T A A T G C C G T A C G T A C G A T C G A T C A G T T C A G A G T C A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CACAATTTGC-
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C T A A T G C C G T A C G T A C G A T C G A T C A G T T C A G A G T C A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CACAATTTGC-
CTCACACAATGGCGC
 A C G T A C G T A C G T A C G T A G T C G C T A A T G C C G T A C G T A C G A T C G A T C A G T T C A G A G T C A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Dlx1/MA0879.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACAATTTGC
CCTAATTATC
 A G T C G C T A A T G C C G T A C G T A C G A T C G A T C A G T T C A G A G T C
T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CACAATTTGC----
----ATTTGCATAT
 A G T C G C T A A T G C C G T A C G T A C G A T C G A T C A G T T C A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACAATTTGC
AACAAT----
 A G T C G C T A A T G C C G T A C G T A C G A T C G A T C A G T T C A G A G T C
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T