Information for 12-GAATGAATGG (Motif 21)

C T A G T G C A G T C A C G A T A C T G T C G A G T C A A G C T C T A G C T A G
Reverse Opposite:
A G T C G A T C T C G A A C G T A G C T A G T C C G T A A C G T A C G T A G T C
p-value:1e-9
log p-value:-2.169e+01
Information Content per bp:1.824
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif201.8
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets52.5 +/- 25.0bp
Average Position of motif in Background49.6 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.83
Offset:-5
Orientation:forward strand
Alignment:-----GAATGAATGG-
ACTATGAATGAATGAT
 A C G T A C G T A C G T A C G T A C G T C T A G T G C A G T C A C G A T A C T G T C G A G T C A A G C T C T A G C T A G A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GAATGAATGG----
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T C T A G T G C A G T C A C G A T A C T G T C G A G T C A A G C T C T A G C T A G A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----GAATGAATGG
NNTNTCATGAATGT
 A C G T A C G T A C G T A C G T C T A G T G C A G T C A C G A T A C T G T C G A G T C A A G C T C T A G C T A G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GAATGAATGG---
NNNTATTGAATTGNNN
 A C G T A C G T A C G T C T A G T G C A G T C A C G A T A C T G T C G A G T C A A G C T C T A G C T A G A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAATGAATGG
HNRAATCAAT--
 A C G T A C G T C T A G T G C A G T C A C G A T A C T G T C G A G T C A A G C T C T A G C T A G
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAATGAATGG-----
---TGATTGGCTANN
 C T A G T G C A G T C A C G A T A C T G T C G A G T C A A G C T C T A G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

TEAD1/MA0090.2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GAATGAATGG
NTGGAATGTG---
 A C G T A C G T A C G T C T A G T G C A G T C A C G A T A C T G T C G A G T C A A G C T C T A G C T A G
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAATGAATGG
NNNANTGA----
 A C G T A C G T C T A G T G C A G T C A C G A T A C T G T C G A G T C A A G C T C T A G C T A G
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAATGAATGG
TGGAATGT----
 A C G T A C G T C T A G T G C A G T C A C G A T A C T G T C G A G T C A A G C T C T A G C T A G
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAATGAATGG
--TTGATTGN
 C T A G T G C A G T C A C G A T A C T G T C G A G T C A A G C T C T A G C T A G
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G