Information for 8-SCGRAAGGAA (Motif 12)

A T C G A T G C C T A G C T G A T C G A C T G A C A T G T C A G T C G A T G C A
Reverse Opposite:
A C G T A G C T A G T C G T A C A G C T A G C T A G C T G A T C T A C G A T G C
p-value:1e-10
log p-value:-2.490e+01
Information Content per bp:1.615
Number of Target Sequences with motif111.0
Percentage of Target Sequences with motif12.89%
Number of Background Sequences with motif3088.2
Percentage of Background Sequences with motif6.56%
Average Position of motif in Targets53.0 +/- 25.3bp
Average Position of motif in Background51.2 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:SCGRAAGGAA
---AGAGGAA
 A T C G A T G C C T A G C T G A T C G A C T G A C A T G T C A G T C G A T G C A
A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:SCGRAAGGAA----
--NDCAGGAARTNN
 A T C G A T G C C T A G C T G A T C G A C T G A C A T G T C A G T C G A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

ELF3/MA0640.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---SCGRAAGGAA
AACCCGGAAGTAA
 A C G T A C G T A C G T A T C G A T G C C T A G C T G A T C G A C T G A C A T G T C A G T C G A T G C A
G C T A G C T A T A G C T A G C T G A C C T A G A C T G T C G A G C T A C T A G G A C T C T G A C T G A

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--SCGRAAGGAA
ANCCGGAAGT--
 A C G T A C G T A T C G A T G C C T A G C T G A T C G A C T G A C A T G T C A G T C G A T G C A
C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:SCGRAAGGAA-
CCGGAAGTGGC
 A T C G A T G C C T A G C T G A T C G A C T G A C A T G T C A G T C G A T G C A A C G T
T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C

ETV6/MA0645.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-SCGRAAGGAA
AGCGGAAGTG-
 A C G T A T C G A T G C C T A G C T G A T C G A C T G A C A T G T C A G T C G A T G C A
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T

PB0011.1_Ehf_1/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----SCGRAAGGAA
AGGACCCGGAAGTAA
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C C T A G C T G A T C G A C T G A C A T G T C A G T C G A T G C A
T G C A A C T G C A T G C G T A A G T C T A G C T G A C C T A G A C T G C G T A C G T A T C A G G A C T C G T A C T G A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:SCGRAAGGAA--
--NACAGGAAAT
 A T C G A T G C C T A G C T G A T C G A C T G A C A T G T C A G T C G A T G C A A C G T A C G T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:SCGRAAGGAA---
---ACAGGAAGTG
 A T C G A T G C C T A G C T G A T C G A C T G A C A T G T C A G T C G A T G C A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

ETS(ETS)/Promoter/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--SCGRAAGGAA
AACCGGAAGT--
 A C G T A C G T A T C G A T G C C T A G C T G A T C G A C T G A C A T G T C A G T C G A T G C A
T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T A C G T A C G T