Information for 7-TWCARAAGAWWGC (Motif 10)

A C G T C G A T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G A T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G A T A C G T G T A C A C G T A C G T A G C T A C G T C T A G C G T A C G T A
p-value:1e-11
log p-value:-2.647e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.7 +/- 28.7bp
Average Position of motif in Background20.2 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TWCARAAGAWWGC-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G A T A C T G A G T C A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TWCARAAGAWWGC
ANTTCTNNAGAA---
 A C G T A C G T A C G T C G A T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G A T A C T G A G T C
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TWCARAAGAWWGC
TTCCKNAGAA---
 A C G T C G A T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G A T A C T G A G T C
G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TWCARAAGAWWGC-----
RTTKCADNNKRTTGCATNAN
 A C G T A C G T A C G T C G A T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G A T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T C G A C G A T A C G T C A T G T A G C G C T A C A G T A G C T T G A C C A G T T C G A A G C T A C G T C A T G G T A C G T C A G C A T G C T A C G T A A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TWCARAAGAWWGC----
--GAAAAAATTGCAAGG
 A C G T C G A T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G A T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

Stat6/MA0520.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TWCARAAGAWWGC
ANTTCTCAGGAANNN
 A C G T A C G T A C G T C G A T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G A T A C T G A G T C
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TWCARAAGAWWGC
ATTTGCATAACAAAG-
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G A T A C T G A G T C
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TWCARAAGAWWGC
CGGTTTCAAA-------
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G A T A C T G A G T C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TWCARAAGAWWGC
CAATTGCAAAAATAT--
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G A T A C T G A G T C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TWCARAAGAWWGC
NATTCAAAT------
 A C G T A C G T A C G T C G A T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G A T A C T G A G T C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T