p-value: | 1e-11 |
log p-value: | -2.647e+01 |
Information Content per bp: | 1.935 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.69% |
Number of Background Sequences with motif | 2.4 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 53.0 +/- 24.3bp |
Average Position of motif in Background | 52.1 +/- 16.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CTCTCTGCCAAAG ----TTGCCAAG- |
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NFIA/MA0670.1/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTCTCTGCCAAAG ---GGTGCCAAGT |
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NFIC/MA0161.1/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CTCTCTGCCAAAG -----TGCCAA-- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTCTCTGCCAAAG ---CGTGCCAAG- |
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PB0140.1_Irf6_2/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CTCTCTGCCAAAG ACCACTCTCGGTCAC-- |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CTCTCTGCCAAAG ---GCTGTCAA-- |
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PB0195.1_Zbtb3_2/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTCTCTGCCAAAG- CAATCACTGGCAGAAT |
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MEIS3/MA0775.1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CTCTCTGCCAAAG ---CCTGTCAA-- |
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Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CTCTCTGCCAAAG ---RHTGWCAR-- |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 10 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CTCTCTGCCAAAG TGGCAGNCTGCCAG-- |
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