Information for 5-ACAGCAMGCG (Motif 8)

C G T A T A G C G T C A T A C G T G A C T G C A T G C A A T C G A T G C C T A G
Reverse Opposite:
G A T C T A C G T A G C A C G T A C G T A C T G A T G C C A G T A T C G G C A T
p-value:1e-11
log p-value:-2.721e+01
Information Content per bp:1.452
Number of Target Sequences with motif145.0
Percentage of Target Sequences with motif16.11%
Number of Background Sequences with motif4004.5
Percentage of Background Sequences with motif8.81%
Average Position of motif in Targets47.5 +/- 26.3bp
Average Position of motif in Background50.7 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAMGCG-
CACAGCAGGGGG
 A C G T C G T A T A G C G T C A T A C G T G A C T G C A T G C A A T C G A T G C C T A G A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ACAGCAMGCG-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T C G T A T A G C G T C A T A C G T G A C T G C A T G C A A T C G A T G C C T A G A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ACAGCAMGCG-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T C G T A T A G C G T C A T A C G T G A C T G C A T G C A A T C G A T G C C T A G A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCAMGCG
CACAGN-----
 A C G T C G T A T A G C G T C A T A C G T G A C T G C A T G C A A T C G A T G C C T A G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACAGCAMGCG-
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T C G T A T A G C G T C A T A C G T G A C T G C A T G C A A T C G A T G C C T A G A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACAGCAMGCG
ACAGGAAGTG
 C G T A T A G C G T C A T A C G T G A C T G C A T G C A A T C G A T G C C T A G
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACAGCAMGCG
DCTCAGCAGG--
 A C G T A C G T C G T A T A G C G T C A T A C G T G A C T G C A T G C A A T C G A T G C C T A G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACAGCAMGCG
ACAGGAAGTG
 C G T A T A G C G T C A T A C G T G A C T G C A T G C A A T C G A T G C C T A G
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACAGCAMGCG---
DCHCAGCAGGRGGCC
 A C G T A C G T C G T A T A G C G T C A T A C G T G A C T G C A T G C A A T C G A T G C C T A G A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAMGCG
AACAGGAAGT-
 A C G T C G T A T A G C G T C A T A C G T G A C T G C A T G C A A T C G A T G C C T A G
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T