Information for 6-TGTGCTCWARAGG (Motif 5)

A C G T A C T G C G A T A C T G A G T C A C G T A G T C C G T A G T C A C T A G C G T A C T A G C T A G
Reverse Opposite:
A G T C A G T C A C G T A G T C C A G T C G A T A C T G C G T A A C T G A G T C C G T A A G T C G T C A
p-value:1e-12
log p-value:-2.867e+01
Information Content per bp:1.850
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.0 +/- 20.1bp
Average Position of motif in Background44.2 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TGTGCTCWARAGG
CGAACAGTGCTCACTAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G T C A C G T A G T C C G T A G T C A C T A G C G T A C T A G C T A G
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGTGCTCWARAGG---
-GAGGTCAAAAGGTCA
 A C G T A C T G C G A T A C T G A G T C A C G T A G T C C G T A G T C A C T A G C G T A C T A G C T A G A C G T A C G T A C G T
A C G T T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGTGCTCWARAGG
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G T C A C G T A G T C C G T A G T C A C T A G C G T A C T A G C T A G
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGCTCWARAGG
NNGTATGTGCACATNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G T C A C G T A G T C C G T A G T C A C T A G C G T A C T A G C T A G
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G A C G T

RARA/MA0729.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGTGCTCWARAGG------
-GAGGTCAAAAGGTCAATG
 A C G T A C T G C G A T A C T G A G T C A C G T A G T C C G T A G T C A C T A G C G T A C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGTGCTCWARAGG
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G T C A C G T A G T C C G T A G T C A C T A G C G T A C T A G C T A G
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGTGCTCWARAGG----
-AAGGTCAAAAGGTCAA
 A C G T A C T G C G A T A C T G A G T C A C G T A G T C C G T A G T C A C T A G C G T A C T A G C T A G A C G T A C G T A C G T A C G T
A C G T T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGTGCTCWARAGG
--NGCTN------
 A C G T A C T G C G A T A C T G A G T C A C G T A G T C C G T A G T C A C T A G C G T A C T A G C T A G
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGTGCTCWARAGG--
--TGCCCTGAGGGCA
 A C G T A C T G C G A T A C T G A G T C A C G T A G T C C G T A G T C A C T A G C G T A C T A G C T A G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGTGCTCWARAGG
CNGTCCTCCC----
 A C G T A C G T A C T G C G A T A C T G A G T C A C G T A G T C C G T A G T C A C T A G C G T A C T A G C T A G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T