Information for 13-CTGGGAGTCTGCG (Motif 16)

A G T C C G A T A C T G A C T G A C T G C T G A C T A G A G C T G T A C A C G T A T C G T G A C A C T G
Reverse Opposite:
G T A C A C T G A T G C C G T A A C T G T C G A G A T C G A C T A G T C A G T C G T A C C G T A A C T G
p-value:1e-8
log p-value:-1.901e+01
Information Content per bp:1.776
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif30.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets55.0 +/- 26.5bp
Average Position of motif in Background40.8 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTGGGAGTCTGCG
WDNCTGGGCA------
 A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G C T G A C T A G A G C T G T A C A C G T A T C G T G A C A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGGGAGTCTGCG-
CTGGCAGNCTGCCA
 A G T C C G A T A C T G A C T G A C T G C T G A C T A G A G C T G T A C A C G T A T C G T G A C A C T G A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

PB0201.1_Zfp281_2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGGGAGTCTGCG
NNNATTGGGGGTNTCCT
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G C T G A C T A G A G C T G T A C A C G T A T C G T G A C A C T G
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTGGGAGTCTGCG--
----GCGCCTGCGCA
 A G T C C G A T A C T G A C T G A C T G C T G A C T A G A G C T G T A C A C G T A T C G T G A C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTGGGAGTCTGCG
--VBSYGTCTGG-
 A G T C C G A T A C T G A C T G A C T G C T G A C T A G A G C T G T A C A C G T A T C G T G A C A C T G
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTGGGAGTCTGCG
--GGGAATTTCC-
 A G T C C G A T A C T G A C T G A C T G C T G A C T A G A G C T G T A C A C G T A T C G T G A C A C T G
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------CTGGGAGTCTGCG
RGSMTBCTGGGAAAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G C T G A C T A G A G C T G T A C A C G T A T C G T G A C A C T G
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------CTGGGAGTCTGCG
NCNCAGCGGGGGGTC----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G C T G A C T A G A G C T G T A C A C G T A T C G T G A C A C T G
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.52
Offset:-9
Orientation:forward strand
Alignment:---------CTGGGAGTCTGCG
GGGGCTYGKCTGGGA-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G C T G A C T A G A G C T G T A C A C G T A T C G T G A C A C T G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTGGGAGTCTGCG
TCCCCTGGGGAC-----
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G C T G A C T A G A G C T G T A C A C G T A T C G T G A C A C T G
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T