Information for 8-AGACAGTGCCAGGAGC (Motif 8)

C T G A A C T G C G T A A T G C C G T A C T A G C A G T A C T G A G T C G T A C C T G A A C T G A C T G C G T A C T A G A T G C
Reverse Opposite:
A T C G A G T C A C G T A G T C A G T C A G C T A C T G A C T G A G T C G T C A A G T C A C G T A T C G A C G T A G T C A G C T
p-value:1e-11
log p-value:-2.680e+01
Information Content per bp:1.902
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.8 +/- 12.9bp
Average Position of motif in Background76.1 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AGACAGTGCCAGGAGC
-----TTGCCAAG---
 C T G A A C T G C G T A A T G C C G T A C T A G C A G T A C T G A G T C G T A C C T G A A C T G A C T G C G T A C T A G A T G C
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGACAGTGCCAGGAGC
----CGTGCCAAG---
 C T G A A C T G C G T A A T G C C G T A C T A G C A G T A C T G A G T C G T A C C T G A A C T G A C T G C G T A C T A G A T G C
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:AGACAGTGCCAGGAGC
------TGCCAA----
 C T G A A C T G C G T A A T G C C G T A C T A G C A G T A C T G A G T C G T A C C T G A A C T G A C T G C G T A C T A G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGACAGTGCCAGGAGC--
--NNATTGACAGGTGCTT
 C T G A A C T G C G T A A T G C C G T A C T A G C A G T A C T G A G T C G T A C C T G A A C T G A C T G C G T A C T A G A T G C A C G T A C G T
A C G T A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AGACAGTGCCAGGAGC
----GGTGCCAAGT--
 C T G A A C T G C G T A A T G C C G T A C T A G C A G T A C T G A G T C G T A C C T G A A C T G A C T G C G T A C T A G A T G C
A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGACAGTGCCAGGAGC
TAGAANVTTCTAGAA--
 A C G T C T G A A C T G C G T A A T G C C G T A C T A G C A G T A C T G A G T C G T A C C T G A A C T G A C T G C G T A C T A G A T G C
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:AGACAGTGCCAGGAGC-
-------NNCAGGTGCG
 C T G A A C T G C G T A A T G C C G T A C T A G C A G T A C T G A G T C G T A C C T G A A C T G A C T G C G T A C T A G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.50
Offset:6
Orientation:forward strand
Alignment:AGACAGTGCCAGGAGC--
------TGTCAGGGGGCG
 C T G A A C T G C G T A A T G C C G T A C T A G C A G T A C T G A G T C G T A C C T G A A C T G A C T G C G T A C T A G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:AGACAGTGCCAGGAGC-
-------GACAGGTGTN
 C T G A A C T G C G T A A T G C C G T A C T A G C A G T A C T G A G T C G T A C C T G A A C T G A C T G C G T A C T A G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:AGACAGTGCCAGGAGC-
-------NNCAGGTGNN
 C T G A A C T G C G T A A T G C C G T A C T A G C A G T A C T G A G T C G T A C C T G A A C T G A C T G C G T A C T A G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G