Information for 4-CACAGCGCCCCCT (Motif 2)

T G A C C T G A A G T C T C G A A C T G A G T C C A T G G T A C A T G C G A T C A G T C G T A C A G C T
Reverse Opposite:
T C G A A C T G T C A G C T A G A T C G C A T G G T A C C T A G A G T C A C G T C T A G G A C T A C T G
p-value:1e-52
log p-value:-1.212e+02
Information Content per bp:1.760
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif236.2
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets51.5 +/- 19.5bp
Average Position of motif in Background49.8 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CACAGCGCCCCCT----
GGTCCCGCCCCCTTCTC
 T G A C C T G A A G T C T C G A A C T G A G T C C A T G G T A C A T G C G A T C A G T C G T A C A G C T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CACAGCGCCCCCT------
CNNBRGCGCCCCCTGSTGGC
 A C G T T G A C C T G A A G T C T C G A A C T G A G T C C A T G G T A C A T G C G A T C A G T C G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CACAGCGCCCCCT--------
--TAGCGCCCCCTGGTGGCCA
 T G A C C T G A A G T C T C G A A C T G A G T C C A T G G T A C A T G C G A T C A G T C G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACAGCGCCCCCT
CACAGN-------
 T G A C C T G A A G T C T C G A A C T G A G T C C A T G G T A C A T G C G A T C A G T C G T A C A G C T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CACAGCGCCCCCT--------
-ANAGTGCCACCTGGTGGCCA
 T G A C C T G A A G T C T C G A A C T G A G T C C A T G G T A C A T G C G A T C A G T C G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CACAGCGCCCCCT----
-----CGCCCCCTGACA
 T G A C C T G A A G T C T C G A A C T G A G T C C A T G G T A C A T G C G A T C A G T C G T A C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

SP8/MA0747.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CACAGCGCCCCCT
-GCCACGCCCACT
 T G A C C T G A A G T C T C G A A C T G A G T C C A T G G T A C A T G C G A T C A G T C G T A C A G C T
A C G T T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CACAGCGCCCCCT
-GCTCCGCCCMCY
 T G A C C T G A A G T C T C G A A C T G A G T C C A T G G T A C A T G C G A T C A G T C G T A C A G C T
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACAGCGCCCCCT--
TAAGCCACGCCCCCTTT
 A C G T A C G T T G A C C T G A A G T C T C G A A C T G A G T C C A T G G T A C A T G C G A T C A G T C G T A C A G C T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

KLF16/MA0741.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CACAGCGCCCCCT
-GCCACGCCCCC-
 T G A C C T G A A G T C T C G A A C T G A G T C C A T G G T A C A T G C G A T C A G T C G T A C A G C T
A C G T T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C A C G T