Information for 8-AAAAGTGGTTTTG (Motif 7)

C G T A C G T A C G T A C G T A A C T G C A G T A C T G C T A G C G A T C G A T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A C G T A A G T C A G T C G T C A A G T C A C G T A C G T A C G T A C G T
p-value:1e-10
log p-value:-2.518e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.8 +/- 17.2bp
Average Position of motif in Background77.4 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAAAGTGGTTTTG
NAAACCGGTTTT-
 C G T A C G T A C G T A C G T A A C T G C A G T A C T G C T A G C G A T C G A T A C G T A C G T A C T G
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AAAAGTGGTTTTG
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G C A G T A C T G C T A G C G A T C G A T A C G T A C G T A C T G
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PH0115.1_Nkx2-6/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AAAAGTGGTTTTG
AATNTTAAGTGGNTNN-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G C A G T A C T G C T A G C G A T C G A T A C G T A C G T A C T G
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AAAAGTGGTTTTG
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G C A G T A C T G C T A G C G A T C G A T A C G T A C G T A C T G
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

Crx/MA0467.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAAAGTGGTTTTG
--AAGAGGATTAG
 C G T A C G T A C G T A C G T A A C T G C A G T A C T G C T A G C G A T C G A T A C G T A C G T A C T G
A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAAAGTGGTTTTG
TTAAGTGGT----
 C G T A C G T A C G T A C G T A A C T G C A G T A C T G C T A G C G A T C G A T A C G T A C G T A C T G
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAAAGTGGTTTTG
NTCAAGTGGN----
 A C G T C G T A C G T A C G T A C G T A A C T G C A G T A C T G C T A G C G A T C G A T A C G T A C G T A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAAAGTGGTTTTG
TTAAGTGGN----
 C G T A C G T A C G T A C G T A A C T G C A G T A C T G C T A G C G A T C G A T A C G T A C G T A C T G
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AAAAGTGGTTTTG
AATTTCAAGTGGCTTN-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G C A G T A C T G C T A G C G A T C G A T A C G T A C G T A C T G
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AAAAGTGGTTTTG
AAATTCAAGTGGNTTN-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G C A G T A C T G C T A G C G A T C G A T A C G T A C G T A C T G
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T