Information for 4-GRTGSCASCA (Motif 3)

A T C G T C G A C A G T C T A G A T C G A T G C C G T A A T C G A G T C G C T A
Reverse Opposite:
C G A T T C A G T A G C G C A T T A C G T A G C G A T C G T C A A G C T T A G C
p-value:1e-34
log p-value:-8.031e+01
Information Content per bp:1.466
Number of Target Sequences with motif111.0
Percentage of Target Sequences with motif13.57%
Number of Background Sequences with motif1590.6
Percentage of Background Sequences with motif3.31%
Average Position of motif in Targets51.1 +/- 21.8bp
Average Position of motif in Background49.8 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GRTGSCASCA--
SCTGTCARCACC
 A T C G T C G A C A G T C T A G A T C G A T G C C G T A A T C G A G T C G C T A A C G T A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GRTGSCASCA----
ACTATGCCAACCTACC
 A C G T A C G T A T C G T C G A C A G T C T A G A T C G A T G C C G T A A T C G A G T C G C T A A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GRTGSCASCA
-ATGCCAACC
 A T C G T C G A C A G T C T A G A T C G A T G C C G T A A T C G A G T C G C T A
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GRTGSCASCA----
---GTCAGCANNTN
 A T C G T C G A C A G T C T A G A T C G A T G C C G T A A T C G A G T C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GRTGSCASCA-
-ATTGCATCAK
 A T C G T C G A C A G T C T A G A T C G A T G C C G T A A T C G A G T C G C T A A C G T
A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GRTGSCASCA-
-ATTGCATCAT
 A T C G T C G A C A G T C T A G A T C G A T G C C G T A A T C G A G T C G C T A A C G T
A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

JUN/MA0488.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GRTGSCASCA----
-ATGACATCATCNN
 A T C G T C G A C A G T C T A G A T C G A T G C C G T A A T C G A G T C G C T A A C G T A C G T A C G T A C G T
A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GRTGSCASCA
TGAGTCAGCA
 A T C G T C G A C A G T C T A G A T C G A T G C C G T A A T C G A G T C G C T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GRTGSCASCA-----
NCTANGTCAGCAAATTT
 A C G T A C G T A T C G T C G A C A G T C T A G A T C G A T G C C G T A A T C G A G T C G C T A A C G T A C G T A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GRTGSCASCA
--TGACACCT
 A T C G T C G A C A G T C T A G A T C G A T G C C G T A A T C G A G T C G C T A
A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T