Information for 9-GTGAAAAATT (Motif 14)

A T C G C G A T T A C G C G T A C T G A C T G A C G T A T G C A G A C T A G C T
Reverse Opposite:
T C G A C T G A A C G T G C A T A G C T G A C T A C G T A T G C C G T A T A G C
p-value:1e-7
log p-value:-1.817e+01
Information Content per bp:1.682
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif6.97%
Number of Background Sequences with motif1462.5
Percentage of Background Sequences with motif3.04%
Average Position of motif in Targets45.7 +/- 28.8bp
Average Position of motif in Background49.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTGAAAAATT--
GGTTAAACATTAA
 A C G T A T C G C G A T T A C G C G T A C T G A C T G A C G T A T G C A G A C T A G C T A C G T A C G T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTGAAAAATT-
TACTGGAAAAAAAA
 A C G T A C G T A C G T A T C G C G A T T A C G C G T A C T G A C T G A C G T A T G C A G A C T A G C T A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTGAAAAATT
NATGGAAAAN-
 A C G T A T C G C G A T T A C G C G T A C T G A C T G A C G T A T G C A G A C T A G C T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTGAAAAATT--
NNTNNCAATATTAG
 A C G T A C G T A T C G C G A T T A C G C G T A C T G A C T G A C G T A T G C A G A C T A G C T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTGAAAAATT--
NNTNNCAATATTAG
 A C G T A C G T A T C G C G A T T A C G C G T A C T G A C T G A C G T A T G C A G A C T A G C T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGAAAAATT--
GTTAATNATTAA
 A T C G C G A T T A C G C G T A C T G A C T G A C G T A T G C A G A C T A G C T A C G T A C G T
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTGAAAAATT--
ACCGTGACTAATTNN
 A C G T A C G T A C G T A T C G C G A T T A C G C G T A C T G A C T G A C G T A T G C A G A C T A G C T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTGAAAAATT
-TGGAAAA--
 A T C G C G A T T A C G C G T A C T G A C T G A C G T A T G C A G A C T A G C T
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTGAAAAATT-
-TGATTGATGA
 A T C G C G A T T A C G C G T A C T G A C T G A C G T A T G C A G A C T A G C T A C G T
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTGAAAAATT------
-GAAAAAATTGCAAGG
 A T C G C G A T T A C G C G T A C T G A C T G A C G T A T G C A G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G