Information for 6-TTGCTGCCCADCTGTG (Motif 9)

C A G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A C A G T A G T C C G A T A T C G A C G T A C T G
Reverse Opposite:
A G T C G T C A A T G C C G T A C T A G G A C T A C G T A C T G A C T G A C T G A G T C C G T A A C T G G T A C C G T A G T C A
p-value:1e-10
log p-value:-2.501e+01
Information Content per bp:1.842
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.6 +/- 18.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TTGCTGCCCADCTGTG
---ATGCCCACC----
 C A G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A C A G T A G T C C G A T A T C G A C G T A C T G
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTGCTGCCCADCTGTG
---CTGCCCGCA----
 C A G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A C A G T A G T C C G A T A T C G A C G T A C T G
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTGCTGCCCADCTGTG
GGGTGTGCCCAAAAGG-
 A C G T C A G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A C A G T A G T C C G A T A T C G A C G T A C T G
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTGCTGCCCADCTGTG-
---NTGCCCANNGGTNA
 C A G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A C A G T A G T C C G A T A T C G A C G T A C T G A C G T
A C G T A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TTGCTGCCCADCTGTG
----TGCCCAGNHW--
 C A G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A C A G T A G T C C G A T A T C G A C G T A C T G
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TTGCTGCCCADCTGTG-
--GGCCYCCTGCTGDGH
 C A G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A C A G T A G T C C G A T A T C G A C G T A C T G A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TTGCTGCCCADCTGTG---
----NNTCCTGCTGTGNNN
 C A G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A C A G T A G T C C G A T A T C G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TTGCTGCCCADCTGTG
----CCCCCTGCTGTG
 C A G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A C A G T A G T C C G A T A T C G A C G T A C T G
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TTGCTGCCCADCTGTG-
-------CCAGCTGTTN
 C A G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A C A G T A G T C C G A T A T C G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TTGCTGCCCADCTGTG
AATTTGCTGAC--------
 A C G T A C G T A C G T C A G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A C A G T A G T C C G A T A T C G A C G T A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T