Information for 10-AGGTGTCVCTGAC (Motif 10)

C G T A A C T G C T A G A C G T A C T G A C G T A G T C T A C G A G T C A C G T A T C G C G T A A G T C
Reverse Opposite:
A C T G C G A T A T G C C G T A A C T G A G T C A C T G G T C A A G T C G T C A A G T C A G T C A C G T
p-value:1e-10
log p-value:-2.428e+01
Information Content per bp:1.866
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 21.3bp
Average Position of motif in Background48.7 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTCVCTGAC
GCGGAGGTGTCGCCTC-
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G A C G T A C T G A C G T A G T C T A C G A G T C A C G T A T C G C G T A A G T C
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGGTGTCVCTGAC
AGGTGTCA-----
 C G T A A C T G C T A G A C G T A C T G A C G T A G T C T A C G A G T C A C G T A T C G C G T A A G T C
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTCVCTGAC-
AAGGKGRCGCAGGCA
 A C G T C G T A A C T G C T A G A C G T A C T G A C G T A G T C T A C G A G T C A C G T A T C G C G T A A G T C A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGGTGTCVCTGAC--
AGATGCTRCTRCCHT
 C G T A A C T G C T A G A C G T A C T G A C G T A G T C T A C G A G T C A C G T A T C G C G T A A G T C A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTCVCTGAC-
NAGGTCACNNTGACC
 A C G T C G T A A C T G C T A G A C G T A C T G A C G T A G T C T A C G A G T C A C G T A T C G C G T A A G T C A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR1/MA0112.3/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTCVCTGAC---
AAGGTCACGGTGACCTG
 A C G T C G T A A C T G C T A G A C G T A C T G A C G T A G T C T A C G A G T C A C G T A T C G C G T A A G T C A C G T A C G T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGGTGTCVCTGAC-
--RGGGCACTAACY
 C G T A A C T G C T A G A C G T A C T G A C G T A G T C T A C G A G T C A C G T A T C G C G T A A G T C A C G T
A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGTCVCTGAC
NNCAGGTGNN------
 A C G T A C G T A C G T C G T A A C T G C T A G A C G T A C T G A C G T A G T C T A C G A G T C A C G T A T C G C G T A A G T C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGGTGTCVCTGAC--
---TGACCTTGACCT
 C G T A A C T G C T A G A C G T A C T G A C G T A G T C T A C G A G T C A C G T A T C G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGTGTCVCTGAC--
-NAGGTCANTGACCT
 C G T A A C T G C T A G A C G T A C T G A C G T A G T C T A C G A G T C A C G T A T C G C G T A A G T C A C G T A C G T
A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T