Information for 6-CTCCGGGAGG (Motif 4)

A T G C A C G T A T G C T G A C C A T G A C T G A C T G C G T A A C T G A T C G
Reverse Opposite:
A T G C G T A C C G A T T G A C A G T C G T A C A C T G A T C G C G T A A T C G
p-value:1e-18
log p-value:-4.254e+01
Information Content per bp:1.840
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif6.02%
Number of Background Sequences with motif620.8
Percentage of Background Sequences with motif1.30%
Average Position of motif in Targets51.6 +/- 29.2bp
Average Position of motif in Background50.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTCCGGGAGG--
CCCCCCCGGGGGGGT
 A C G T A C G T A C G T A T G C A C G T A T G C T G A C C A T G A C T G A C T G C G T A A C T G A T C G A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTCCGGGAGG----
----GGGAGGACNG
 A T G C A C G T A T G C T G A C C A T G A C T G A C T G C G T A A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTCCGGGAGG
TTCCNGGAAG
 A T G C A C G T A T G C T G A C C A T G A C T G A C T G C G T A A C T G A T C G
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTCCGGGAGG--
CCCCCCCGGGGGGGT
 A C G T A C G T A C G T A T G C A C G T A T G C T G A C C A T G A C T G A C T G C G T A A C T G A T C G A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTCCGGGAGG-
CACCCCCGGGGGGG
 A C G T A C G T A C G T A T G C A C G T A T G C T G A C C A T G A C T G A C T G C G T A A C T G A T C G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0204.1_Zfp740_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGGGAGG-----
ANTNCCGGGGGGAANTT
 A C G T A C G T A T G C A C G T A T G C T G A C C A T G A C T G A C T G C G T A A C T G A T C G A C G T A C G T A C G T A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTCCGGGAGG
GCTCCG-----
 A C G T A T G C A C G T A T G C T G A C C A T G A C T G A C T G C G T A A C T G A T C G
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTCCGGGAGG--
NCNCAGCGGGGGGTC
 A C G T A C G T A C G T A T G C A C G T A T G C T G A C C A T G A C T G A C T G C G T A A C T G A T C G A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTCCGGGAGG
ACATCCTGNT--
 A C G T A C G T A T G C A C G T A T G C T G A C C A T G A C T G A C T G C G T A A C T G A T C G
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CTCCGGGAGG
NNNCTTTCCAGGAAA
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T A T G C T G A C C A T G A C T G A C T G C G T A A C T G A T C G
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A