Information for 16-TGGAAATTCC (Motif 20)

A C G T A C T G C T A G T C G A T G C A C G T A A G C T A G C T A G T C G T A C
Reverse Opposite:
A C T G T C A G T C G A T C G A G C A T A C G T A G C T G A T C T G A C T G C A
p-value:1e-7
log p-value:-1.748e+01
Information Content per bp:1.692
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.20%
Number of Background Sequences with motif434.8
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets47.1 +/- 25.6bp
Average Position of motif in Background50.6 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.91
Offset:1
Orientation:forward strand
Alignment:TGGAAATTCC-
-GGAAATTCCC
 A C G T A C T G C T A G T C G A T G C A C G T A A G C T A G C T A G T C G T A C A C G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:TGGAAATTCC-
-GGAAATTCCC
 A C G T A C T G C T A G T C G A T G C A C G T A A G C T A G C T A G T C G T A C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:TGGAAATTCC-
-GGAAANCCCC
 A C G T A C T G C T A G T C G A T G C A C G T A A G C T A G C T A G T C G T A C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TGGAAATTCC--
GGGAAATCCCCN
 A C G T A C T G C T A G T C G A T G C A C G T A A G C T A G C T A G T C G T A C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:TGGAAATTCC-
-GGAAATCCCC
 A C G T A C T G C T A G T C G A T G C A C G T A A G C T A G C T A G T C G T A C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TGGAAATTCC---
---GCATTCCAGN
 A C G T A C T G C T A G T C G A T G C A C G T A A G C T A G C T A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAATTCC
NNTGGAAANN--
 A C G T A C G T A C G T A C T G C T A G T C G A T G C A C G T A A G C T A G C T A G T C G T A C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TGGAAATTCC--
--CACATTCCAT
 A C G T A C T G C T A G T C G A T G C A C G T A A G C T A G C T A G T C G T A C A C G T A C G T
A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAATTCC
AATGGAAAAT--
 A C G T A C G T A C G T A C T G C T A G T C G A T G C A C G T A A G C T A G C T A G T C G T A C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TGGAAATTCC---
---RCATTCCWGG
 A C G T A C T G C T A G T C G A T G C A C G T A A G C T A G C T A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G