Information for 12-WASAGGTCGM (Motif 11)

C G A T C G T A T A C G C G T A A C T G A T C G A C G T A G T C A C T G G T C A
Reverse Opposite:
A C G T A G T C A C T G G T C A A T G C A G T C A C G T A T G C A C G T C G T A
p-value:1e-10
log p-value:-2.377e+01
Information Content per bp:1.856
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif47.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets41.7 +/- 21.5bp
Average Position of motif in Background52.8 +/- 38.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0049.1_Nr2f2_1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---WASAGGTCGM---
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T C G A T C G T A T A C G C G T A A C T G A T C G A C G T A G T C A C T G G T C A A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---WASAGGTCGM---
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T C G A T C G T A T A C G C G T A A C T G A T C G A C G T A G T C A C T G G T C A A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:WASAGGTCGM
-AGRGGTCA-
 C G A T C G T A T A C G C G T A A C T G A T C G A C G T A G T C A C T G G T C A
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:WASAGGTCGM---
CAAAGGTCAAGGG
 C G A T C G T A T A C G C G T A A C T G A T C G A C G T A G T C A C T G G T C A A C G T A C G T A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---WASAGGTCGM
ANGNAAAGGTCA-
 A C G T A C G T A C G T C G A T C G T A T A C G C G T A A C T G A T C G A C G T A G T C A C T G G T C A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-WASAGGTCGM
ATCAAGGTCA-
 A C G T C G A T C G T A T A C G C G T A A C T G A T C G A C G T A G T C A C T G G T C A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----WASAGGTCGM-
GAGCAACAGGTGGTT
 A C G T A C G T A C G T A C G T C G A T C G T A T A C G C G T A A C T G A T C G A C G T A G T C A C T G G T C A A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

SCRT2/MA0744.1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----WASAGGTCGM
ATGCAACAGGTGG-
 A C G T A C G T A C G T A C G T C G A T C G T A T A C G C G T A A C T G A T C G A C G T A G T C A C T G G T C A
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:WASAGGTCGM
-TRAGGTCA-
 C G A T C G T A T A C G C G T A A C T G A T C G A C G T A G T C A C T G G T C A
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---WASAGGTCGM----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T C G A T C G T A T A C G C G T A A C T G A T C G A C G T A G T C A C T G G T C A A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C