Information for 6-GAGACGCAGGCTGCCA (Motif 10)

A C T G G T C A A C T G G T C A A G T C A T C G A G T C C G T A A C T G A C T G A G T C C G A T A C T G A G T C G T A C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C C G T A A C T G G T A C A G T C A C G T A C T G A T G C A C T G A C G T A G T C A C G T A G T C
p-value:1e-10
log p-value:-2.416e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.4 +/- 22.0bp
Average Position of motif in Background53.8 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAGACGCAGGCTGCCA
AAGGKGRCGCAGGCA----
 A C G T A C G T A C G T A C T G G T C A A C T G G T C A A G T C A T C G A G T C C G T A A C T G A C T G A G T C C G A T A C T G A G T C G T A C C G T A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAGACGCAGGCTGCCA-
---TGGCAGNCTGCCAG
 A C T G G T C A A C T G G T C A A G T C A T C G A G T C C G T A A C T G A C T G A G T C C G A T A C T G A G T C G T A C C G T A A C G T
A C G T A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGACGCAGGCTGCCA
-AGCCTCAGGCA----
 A C T G G T C A A C T G G T C A A G T C A T C G A G T C C G T A A C T G A C T G A G T C C G A T A C T G A G T C G T A C C G T A
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAGACGCAGGCTGCCA
-AGCCTCAGGCA----
 A C T G G T C A A C T G G T C A A G T C A T C G A G T C C G T A A C T G A C T G A G T C C G A T A C T G A G T C G T A C C G T A
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAGACGCAGGCTGCCA
-CGCCTCAGGCA----
 A C T G G T C A A C T G G T C A A G T C A T C G A G T C C G T A A C T G A C T G A G T C C G A T A C T G A G T C G T A C C G T A
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GAGACGCAGGCTGCCA
ATTGCCTCAGGCAAT--
 A C G T A C T G G T C A A C T G G T C A A G T C A T C G A G T C C G T A A C T G A C T G A G T C C G A T A C T G A G T C G T A C C G T A
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.50
Offset:11
Orientation:reverse strand
Alignment:GAGACGCAGGCTGCCA-
-----------TGCCAA
 A C T G G T C A A C T G G T C A A G T C A T C G A G T C C G T A A C T G A C T G A G T C C G A T A C T G A G T C G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GAGACGCAGGCTGCCA-
---TGGCACCATGCCAA
 A C T G G T C A A C T G G T C A A G T C A T C G A G T C C G T A A C T G A C T G A G T C C G A T A C T G A G T C G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.50
Offset:9
Orientation:forward strand
Alignment:GAGACGCAGGCTGCCA--
---------CGTGCCAAG
 A C T G G T C A A C T G G T C A A G T C A T C G A G T C C G T A A C T G A C T G A G T C C G A T A C T G A G T C G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.50
Offset:10
Orientation:forward strand
Alignment:GAGACGCAGGCTGCCA--
----------TTGCCAAG
 A C T G G T C A A C T G G T C A A G T C A T C G A G T C C G T A A C T G A C T G A G T C C G A T A C T G A G T C G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G