Information for 6-TCAGCCAATG (Motif 4)

A G C T A T G C C T G A C A T G T A G C G A T C G C T A G C T A G C A T T C A G
Reverse Opposite:
A G T C C G T A C G A T C G A T C T A G A T C G G T A C G A C T T A C G T C G A
p-value:1e-14
log p-value:-3.410e+01
Information Content per bp:1.680
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif5.92%
Number of Background Sequences with motif753.1
Percentage of Background Sequences with motif1.60%
Average Position of motif in Targets50.6 +/- 27.1bp
Average Position of motif in Background49.0 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TCAGCCAATG--
--AGCCAATCGG
 A G C T A T G C C T G A C A T G T A G C G A T C G C T A G C T A G C A T T C A G A C G T A C G T
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TCAGCCAATG-
ACTAGCCAATCA
 A C G T A G C T A T G C C T G A C A T G T A G C G A T C G C T A G C T A G C A T T C A G A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TCAGCCAATG
--TGCCAA--
 A G C T A T G C C T G A C A T G T A G C G A T C G C T A G C T A G C A T T C A G
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TCAGCCAATG--
AAATGGACCAATCAG
 A C G T A C G T A C G T A G C T A T G C C T G A C A T G T A G C G A T C G C T A G C T A G C A T T C A G A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TCAGCCAATG
CGTGCCAAG-
 A G C T A T G C C T G A C A T G T A G C G A T C G C T A G C T A G C A T T C A G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCAGCCAATG
BCAGACWA--
 A G C T A T G C C T G A C A T G T A G C G A T C G C T A G C T A G C A T T C A G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCAGCCAATG
GTCAGCANNTN
 A C G T A G C T A T G C C T G A C A T G T A G C G A T C G C T A G C T A G C A T T C A G
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCAGCCAATG
-CAGCC----
 A G C T A T G C C T G A C A T G T A G C G A T C G C T A G C T A G C A T T C A G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TCAGCCAATG
CTGAGTCAGCAATTT
 A C G T A C G T A C G T A C G T A C G T A G C T A T G C C T G A C A T G T A G C G A T C G C T A G C T A G C A T T C A G
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TCAGCCAATG-
HWWGTCAGCAWWTTT
 A C G T A C G T A C G T A C G T A G C T A T G C C T G A C A T G T A G C G A T C G C T A G C T A G C A T T C A G A C G T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T