Information for 11-CCTCCAGTGG (Motif 19)

A G T C A G T C A C G T G T A C A G T C C T G A A C T G A C G T A T C G C T A G
Reverse Opposite:
A G T C A T G C G T C A A G T C A G C T A C T G A C T G C G T A A C T G A C T G
p-value:1e-7
log p-value:-1.755e+01
Information Content per bp:1.907
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif104.7
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets64.2 +/- 20.4bp
Average Position of motif in Background56.2 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCTCCAGTGG----
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A G T C A G T C A C G T G T A C A G T C C T G A A C T G A C G T A T C G C T A G A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCTCCAGTGG----
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A G T C A G T C A C G T G T A C A G T C C T G A A C T G A C G T A T C G C T A G A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCTCCAGTGG
-NTCAAGTGG
 A G T C A G T C A C G T G T A C A G T C C T G A A C T G A C G T A T C G C T A G
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCTCCAGTGG-
-NTCAAGTGGN
 A G T C A G T C A C G T G T A C A G T C C T G A A C T G A C G T A T C G C T A G A C G T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTCCAGTGG
CCCCCTGCTGTG-
 A C G T A C G T A C G T A G T C A G T C A C G T G T A C A G T C C T G A A C T G A C G T A T C G C T A G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCTCCAGTGG-
-BTBRAGTGSN
 A G T C A G T C A C G T G T A C A G T C C T G A A C T G A C G T A T C G C T A G A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCAGTGG---------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C A C G T G T A C A G T C C T G A A C T G A C G T A T C G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCTCCAGTGG-
-CTYRAGTGSY
 A G T C A G T C A C G T G T A C A G T C C T G A A C T G A C G T A T C G C T A G A C G T
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCTCCAGTGG
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T G T A C A G T C C T G A A C T G A C G T A T C G C T A G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTCCAGTGG---
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A G T C A G T C A C G T G T A C A G T C C T G A A C T G A C G T A T C G C T A G A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G