Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-100 | -2.308e+02 | 0.0000 | 103.0 | 11.77% | 232.6 | 0.53% | motif file (matrix) |
svg |
2 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-97 | -2.252e+02 | 0.0000 | 186.0 | 21.26% | 1315.5 | 2.98% | motif file (matrix) |
svg |
3 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-83 | -1.920e+02 | 0.0000 | 206.0 | 23.54% | 2027.6 | 4.59% | motif file (matrix) |
svg |
4 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-80 | -1.863e+02 | 0.0000 | 304.0 | 34.74% | 4648.6 | 10.52% | motif file (matrix) |
svg |
5 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-77 | -1.782e+02 | 0.0000 | 310.0 | 35.43% | 4992.3 | 11.30% | motif file (matrix) |
svg |
6 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-75 | -1.740e+02 | 0.0000 | 208.0 | 23.77% | 2298.4 | 5.20% | motif file (matrix) |
svg |
7 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-74 | -1.714e+02 | 0.0000 | 177.0 | 20.23% | 1647.2 | 3.73% | motif file (matrix) |
svg |
8 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-73 | -1.688e+02 | 0.0000 | 109.0 | 12.46% | 513.3 | 1.16% | motif file (matrix) |
svg |
9 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-68 | -1.569e+02 | 0.0000 | 205.0 | 23.43% | 2467.5 | 5.58% | motif file (matrix) |
svg |
10 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-55 | -1.289e+02 | 0.0000 | 173.0 | 19.77% | 2106.6 | 4.77% | motif file (matrix) |
svg |
11 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-53 | -1.241e+02 | 0.0000 | 257.0 | 29.37% | 4568.9 | 10.34% | motif file (matrix) |
svg |
12 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-51 | -1.184e+02 | 0.0000 | 206.0 | 23.54% | 3166.8 | 7.17% | motif file (matrix) |
svg |
13 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-40 | -9.319e+01 | 0.0000 | 97.0 | 11.09% | 886.2 | 2.01% | motif file (matrix) |
svg |
14 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-36 | -8.323e+01 | 0.0000 | 81.0 | 9.26% | 682.9 | 1.55% | motif file (matrix) |
svg |
15 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-35 | -8.100e+01 | 0.0000 | 92.0 | 10.51% | 925.5 | 2.09% | motif file (matrix) |
svg |
16 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-34 | -8.041e+01 | 0.0000 | 84.0 | 9.60% | 769.1 | 1.74% | motif file (matrix) |
svg |
17 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-34 | -7.861e+01 | 0.0000 | 68.0 | 7.77% | 493.9 | 1.12% | motif file (matrix) |
svg |
18 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-33 | -7.740e+01 | 0.0000 | 136.0 | 15.54% | 2056.3 | 4.65% | motif file (matrix) |
svg |
19 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-31 | -7.315e+01 | 0.0000 | 82.0 | 9.37% | 812.6 | 1.84% | motif file (matrix) |
svg |
20 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-31 | -7.259e+01 | 0.0000 | 87.0 | 9.94% | 925.5 | 2.09% | motif file (matrix) |
svg |
21 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-31 | -7.224e+01 | 0.0000 | 117.0 | 13.37% | 1650.4 | 3.73% | motif file (matrix) |
svg |
22 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-30 | -7.032e+01 | 0.0000 | 46.0 | 5.26% | 221.2 | 0.50% | motif file (matrix) |
svg |
23 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-29 | -6.758e+01 | 0.0000 | 54.0 | 6.17% | 352.6 | 0.80% | motif file (matrix) |
svg |
24 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-29 | -6.740e+01 | 0.0000 | 92.0 | 10.51% | 1112.0 | 2.52% | motif file (matrix) |
svg |
25 |
| E-box(bHLH)/Promoter/Homer | 1e-27 | -6.262e+01 | 0.0000 | 51.0 | 5.83% | 342.9 | 0.78% | motif file (matrix) |
svg |
26 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-19 | -4.573e+01 | 0.0000 | 40.0 | 4.57% | 298.2 | 0.67% | motif file (matrix) |
svg |
27 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-11 | -2.724e+01 | 0.0000 | 15.0 | 1.71% | 57.5 | 0.13% | motif file (matrix) |
svg |
28 |
| HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer | 1e-11 | -2.688e+01 | 0.0000 | 59.0 | 6.74% | 1046.0 | 2.37% | motif file (matrix) |
svg |
29 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-11 | -2.662e+01 | 0.0000 | 239.0 | 27.31% | 7877.4 | 17.83% | motif file (matrix) |
svg |
30 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-10 | -2.392e+01 | 0.0000 | 13.0 | 1.49% | 49.2 | 0.11% | motif file (matrix) |
svg |
31 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-8 | -1.946e+01 | 0.0000 | 27.0 | 3.09% | 345.1 | 0.78% | motif file (matrix) |
svg |
32 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-8 | -1.926e+01 | 0.0000 | 12.0 | 1.37% | 59.7 | 0.14% | motif file (matrix) |
svg |
33 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-7 | -1.636e+01 | 0.0000 | 48.0 | 5.49% | 1026.5 | 2.32% | motif file (matrix) |
svg |
34 |
| HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-7 | -1.625e+01 | 0.0000 | 60.0 | 6.86% | 1433.6 | 3.24% | motif file (matrix) |
svg |
35 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-6 | -1.597e+01 | 0.0000 | 42.0 | 4.80% | 848.1 | 1.92% | motif file (matrix) |
svg |
36 |
| CRE(bZIP)/Promoter/Homer | 1e-6 | -1.574e+01 | 0.0000 | 40.0 | 4.57% | 793.4 | 1.80% | motif file (matrix) |
svg |
37 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-6 | -1.448e+01 | 0.0000 | 47.0 | 5.37% | 1063.1 | 2.41% | motif file (matrix) |
svg |
38 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-6 | -1.423e+01 | 0.0000 | 57.0 | 6.51% | 1418.9 | 3.21% | motif file (matrix) |
svg |
39 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-6 | -1.386e+01 | 0.0000 | 41.0 | 4.69% | 888.5 | 2.01% | motif file (matrix) |
svg |
40 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-5 | -1.296e+01 | 0.0000 | 55.0 | 6.29% | 1407.2 | 3.18% | motif file (matrix) |
svg |
41 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-5 | -1.258e+01 | 0.0000 | 40.0 | 4.57% | 903.5 | 2.04% | motif file (matrix) |
svg |
42 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-5 | -1.225e+01 | 0.0000 | 99.0 | 11.31% | 3148.4 | 7.12% | motif file (matrix) |
svg |
43 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-5 | -1.222e+01 | 0.0000 | 19.0 | 2.17% | 278.9 | 0.63% | motif file (matrix) |
svg |
44 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-5 | -1.169e+01 | 0.0001 | 21.0 | 2.40% | 343.0 | 0.78% | motif file (matrix) |
svg |
45 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-4 | -1.121e+01 | 0.0001 | 25.0 | 2.86% | 471.9 | 1.07% | motif file (matrix) |
svg |
46 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-4 | -1.121e+01 | 0.0001 | 16.0 | 1.83% | 221.4 | 0.50% | motif file (matrix) |
svg |
47 |
| ETS(ETS)/Promoter/Homer | 1e-4 | -1.090e+01 | 0.0001 | 37.0 | 4.23% | 869.2 | 1.97% | motif file (matrix) |
svg |
48 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.066e+01 | 0.0002 | 59.0 | 6.74% | 1679.0 | 3.80% | motif file (matrix) |
svg |
49 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-4 | -1.013e+01 | 0.0003 | 37.0 | 4.23% | 902.5 | 2.04% | motif file (matrix) |
svg |
50 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-4 | -9.583e+00 | 0.0005 | 46.0 | 5.26% | 1253.8 | 2.84% | motif file (matrix) |
svg |
51 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-4 | -9.400e+00 | 0.0006 | 39.0 | 4.46% | 1007.3 | 2.28% | motif file (matrix) |
svg |
52 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-4 | -9.387e+00 | 0.0006 | 67.0 | 7.66% | 2075.5 | 4.70% | motif file (matrix) |
svg |
53 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-3 | -9.184e+00 | 0.0007 | 45.0 | 5.14% | 1238.1 | 2.80% | motif file (matrix) |
svg |
54 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-3 | -9.053e+00 | 0.0008 | 158.0 | 18.06% | 5999.6 | 13.58% | motif file (matrix) |
svg |
55 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-3 | -8.950e+00 | 0.0009 | 56.0 | 6.40% | 1672.2 | 3.78% | motif file (matrix) |
svg |
56 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-3 | -8.815e+00 | 0.0010 | 20.0 | 2.29% | 390.7 | 0.88% | motif file (matrix) |
svg |
57 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-3 | -8.607e+00 | 0.0012 | 54.0 | 6.17% | 1617.6 | 3.66% | motif file (matrix) |
svg |
58 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-3 | -8.359e+00 | 0.0015 | 36.0 | 4.11% | 951.9 | 2.15% | motif file (matrix) |
svg |
59 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.060e+00 | 0.0019 | 35.0 | 4.00% | 930.2 | 2.10% | motif file (matrix) |
svg |
60 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -7.949e+00 | 0.0021 | 93.0 | 10.63% | 3275.3 | 7.41% | motif file (matrix) |
svg |
61 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.893e+00 | 0.0022 | 81.0 | 9.26% | 2772.2 | 6.27% | motif file (matrix) |
svg |
62 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.517e+00 | 0.0032 | 147.0 | 16.80% | 5705.6 | 12.91% | motif file (matrix) |
svg |
63 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-3 | -7.432e+00 | 0.0034 | 16.0 | 1.83% | 309.3 | 0.70% | motif file (matrix) |
svg |
64 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.361e+00 | 0.0036 | 52.0 | 5.94% | 1626.1 | 3.68% | motif file (matrix) |
svg |
65 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-3 | -7.344e+00 | 0.0036 | 89.0 | 10.17% | 3166.1 | 7.16% | motif file (matrix) |
svg |
66 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -6.602e+00 | 0.0075 | 84.0 | 9.60% | 3030.2 | 6.86% | motif file (matrix) |
svg |
67 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-2 | -6.123e+00 | 0.0119 | 36.0 | 4.11% | 1082.3 | 2.45% | motif file (matrix) |
svg |
68 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -6.076e+00 | 0.0123 | 87.0 | 9.94% | 3220.4 | 7.29% | motif file (matrix) |
svg |
69 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.063e+00 | 0.0123 | 30.0 | 3.43% | 855.8 | 1.94% | motif file (matrix) |
svg |
70 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.913e+00 | 0.0141 | 43.0 | 4.91% | 1375.2 | 3.11% | motif file (matrix) |
svg |
71 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.889e+00 | 0.0142 | 115.0 | 13.14% | 4488.8 | 10.16% | motif file (matrix) |
svg |
72 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.832e+00 | 0.0148 | 67.0 | 7.66% | 2382.8 | 5.39% | motif file (matrix) |
svg |
73 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-2 | -5.602e+00 | 0.0184 | 26.0 | 2.97% | 731.2 | 1.65% | motif file (matrix) |
svg |
74 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.408e+00 | 0.0220 | 24.0 | 2.74% | 667.8 | 1.51% | motif file (matrix) |
svg |
75 |
| LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.339e+00 | 0.0233 | 5.0 | 0.57% | 54.9 | 0.12% | motif file (matrix) |
svg |
76 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.262e+00 | 0.0248 | 75.0 | 8.57% | 2792.7 | 6.32% | motif file (matrix) |
svg |
77 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-2 | -5.259e+00 | 0.0248 | 67.0 | 7.66% | 2444.3 | 5.53% | motif file (matrix) |
svg |
78 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -5.195e+00 | 0.0259 | 110.0 | 12.57% | 4363.8 | 9.87% | motif file (matrix) |
svg |
79 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-2 | -5.181e+00 | 0.0259 | 94.0 | 10.74% | 3644.4 | 8.25% | motif file (matrix) |
svg |
80 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.041e+00 | 0.0294 | 37.0 | 4.23% | 1201.1 | 2.72% | motif file (matrix) |
svg |
81 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.768e+00 | 0.0382 | 34.0 | 3.89% | 1101.1 | 2.49% | motif file (matrix) |
svg |
82 |
| ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer | 1e-2 | -4.717e+00 | 0.0397 | 20.0 | 2.29% | 556.9 | 1.26% | motif file (matrix) |
svg |
83 |
| NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -4.698e+00 | 0.0400 | 26.0 | 2.97% | 787.6 | 1.78% | motif file (matrix) |
svg |
84 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-2 | -4.686e+00 | 0.0400 | 24.0 | 2.74% | 710.2 | 1.61% | motif file (matrix) |
svg |
85 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-2 | -4.628e+00 | 0.0419 | 39.0 | 4.46% | 1318.2 | 2.98% | motif file (matrix) |
svg |