Information for 3-TTCCTSARACGTGACC (Motif 4)

A C G T A C G T A G T C A G T C C G A T A T G C G C T A C T G A G T C A A G T C T A C G A C G T A C T G C G T A A T G C T G A C
Reverse Opposite:
A C T G A T C G A C G T A G T C T C G A A T G C A C T G A C G T A G C T C A G T A T C G G C T A C T A G T A C G G T C A C G T A
p-value:1e-16
log p-value:-3.837e+01
Information Content per bp:1.726
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.5 +/- 24.9bp
Average Position of motif in Background85.5 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTCCTSARACGTGACC
TTCCTCT---------
 A C G T A C G T A G T C A G T C C G A T A T G C G C T A C T G A G T C A A G T C T A C G A C G T A C T G C G T A A T G C T G A C
C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:TTCCTSARACGTGACC
--------NCGTGACN
 A C G T A C G T A G T C A G T C C G A T A T G C G C T A C T G A G T C A A G T C T A C G A C G T A C T G C G T A A T G C T G A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TTCCTSARACGTGACC-
-----GWAAYHTGABMC
 A C G T A C G T A G T C A G T C C G A T A T G C G C T A C T G A G T C A A G T C T A C G A C G T A C T G C G T A A T G C T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTCCTSARACGTGACC
-TCAGNGAGCGTGAC-
 A C G T A C G T A G T C A G T C C G A T A T G C G C T A C T G A G T C A A G T C T A C G A C G T A C T G C G T A A T G C T G A C
A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T

Arntl/MA0603.1/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TTCCTSARACGTGACC
------NCACGTGACN
 A C G T A C G T A G T C A G T C C G A T A T G C G C T A C T G A G T C A A G T C T A C G A C G T A C T G C G T A A T G C T G A C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TTCCTSARACGTGACC
NNAYTTCCTGHN--------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A T G C G C T A C T G A G T C A A G T C T A C G A C G T A C T G C G T A A T G C T G A C
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TTCCTSARACGTGACC
CATTTCCTGAGAAAT----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A T G C G C T A C T G A G T C A A G T C T A C G A C G T A C T G C G T A A T G C T G A C
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TTCCTSARACGTGACC
CACTTCCTGT---------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A T G C G C T A C T G A G T C A A G T C T A C G A C G T A C T G C G T A A T G C T G A C
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TTCCTSARACGTGACC--
------TCACGTGACCGG
 A C G T A C G T A G T C A G T C C G A T A T G C G C T A C T G A G T C A A G T C T A C G A C G T A C T G C G T A A T G C T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

USF1/MA0093.2/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TTCCTSARACGTGACC
-----GCCACGTGACC
 A C G T A C G T A G T C A G T C C G A T A T G C G C T A C T G A G T C A A G T C T A C G A C G T A C T G C G T A A T G C T G A C
A C G T A C G T A C G T A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C