Information for 8-GCGCCCGCTA (Motif 13)

A C T G A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G G T A C A C T G A C T G A C T G A G T C A C T G G T A C
p-value:1e-9
log p-value:-2.153e+01
Information Content per bp:1.951
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif20.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.4 +/- 27.8bp
Average Position of motif in Background43.1 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCGCCCGCTA---
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GCGCCCGCTA
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T C G T A
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCGCCCGCTA-----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GCGCCCGCTA
NCANGCGCGCGCGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T C G T A
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCGCCCGCTA--
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C T G A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0128.1_Gcm1_2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCGCCCGCTA------
NTCNTCCCCTATNNGNN
 A C G T A C T G A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCGCCCGCTA--
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A C T G A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCGCCCGCTA-------
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C T G A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCGCCCGCTA
AGCGCGCC-----
 A C G T A C G T A C G T A C T G A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T C G T A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCGCCCGCTA
CAACGTCCGCGG
 A C G T A C G T A C T G A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T C G T A
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G