Information for 6-CTGAGATTATTCA (Motif 8)

A G T C C G A T A C T G C G T A A C T G C T G A A C G T C G A T C T G A A C G T A C G T A G T C C G T A
Reverse Opposite:
C G A T A C T G G T C A G T C A A G C T C G T A G T C A A G C T A G T C A C G T A G T C C G T A A C T G
p-value:1e-11
log p-value:-2.538e+01
Information Content per bp:1.860
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.7 +/- 23.9bp
Average Position of motif in Background53.2 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTGAGATTATTCA
TGCTGTGATTT----
 A C G T A C G T A G T C C G A T A C T G C G T A A C T G C T G A A C G T C G A T C T G A A C G T A C G T A G T C C G T A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGATTATTCA
GCAGTGATTT----
 A C G T A G T C C G A T A C T G C G T A A C T G C T G A A C G T C G A T C T G A A C G T A C G T A G T C C G T A
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTGAGATTATTCA-
----GAATATTCAT
 A G T C C G A T A C T G C G T A A C T G C T G A A C G T C G A T C T G A A C G T A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTGAGATTATTCA
--RGGATTAR---
 A G T C C G A T A C T G C G T A A C T G C T G A A C G T C G A T C T G A A C G T A C G T A G T C C G T A
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTGAGATTATTCA
NRRTGACGTCAT---
 A C G T A C G T A G T C C G A T A C T G C G T A A C T G C T G A A C G T C G A T C T G A A C G T A C G T A G T C C G T A
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T A C G T A C G T A C G T

PH0103.1_Meox1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGAGATTATTCA---
CTGAGGTAATTACCNC
 A G T C C G A T A C T G C G T A A C T G C T G A A C G T C G A T C T G A A C G T A C G T A G T C C G T A A C G T A C G T A C G T
G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTGAGATTATTCA
GCTGTGGTTT----
 A C G T A G T C C G A T A C T G C G T A A C T G C T G A A C G T C G A T C T G A A C G T A C G T A G T C C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGAGATTATTCA
NNGAGATAAGA--
 A G T C C G A T A C T G C G T A A C T G C T G A A C G T C G A T C T G A A C G T A C G T A G T C C G T A
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T

PH0045.1_Hoxa1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTGAGATTATTCA---
CTGAGCTAATTACCGT
 A G T C C G A T A C T G C G T A A C T G C T G A A C G T C G A T C T G A A C G T A C G T A G T C C G T A A C G T A C G T A C G T
A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTGAGATTATTCA
AAAGATGATGTCATC--
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G C G T A A C T G C T G A A C G T C G A T C T G A A C G T A C G T A G T C C G T A
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C A C G T A C G T