Information for 11-GCAAATATTTGTT (Motif 15)

T A C G A G T C C G T A C G T A C G T A A G C T G T C A C A G T A C G T C G A T A C T G G A C T A C G T
Reverse Opposite:
C G T A C G T A T G A C C G T A C G T A G C T A A C G T C T G A A C G T A C G T C G A T T C A G A T G C
p-value:1e-9
log p-value:-2.221e+01
Information Content per bp:1.789
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif49.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets58.2 +/- 23.6bp
Average Position of motif in Background51.2 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCAAATATTTGTT-
--GAATGTTTGTTT
 T A C G A G T C C G T A C G T A C G T A A G C T G T C A C A G T A C G T C G A T A C T G G A C T A C G T A C G T
A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCAAATATTTGTT--
-CTAATATTGCTAAA
 T A C G A G T C C G T A C G T A C G T A A G C T G T C A C A G T A C G T C G A T A C T G G A C T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCAAATATTTGTT--
-CTAATATTGCTAAA
 T A C G A G T C C G T A C G T A C G T A A G C T G T C A C A G T A C G T C G A T A C T G G A C T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCAAATATTTGTT
---AATAATT---
 T A C G A G T C C G T A C G T A C G T A A G C T G T C A C A G T A C G T C G A T A C T G G A C T A C G T
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCAAATATTTGTT----
--CTATAATTGTTAGCG
 T A C G A G T C C G T A C G T A C G T A A G C T G T C A C A G T A C G T C G A T A C T G G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCAAATATTTGTT
WAAGTAAAYA------
 A C G T A C G T A C G T T A C G A G T C C G T A C G T A C G T A A G C T G T C A C A G T A C G T C G A T A C T G G A C T A C G T
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCAAATATTTGTT-----
--AANTTATTGTTCTNNA
 T A C G A G T C C G T A C G T A C G T A A G C T G T C A C A G T A C G T C G A T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCAAATATTTGTT
ATATGCAAAT-------
 A C G T A C G T A C G T A C G T T A C G A G T C C G T A C G T A C G T A A G C T G T C A C A G T A C G T C G A T A C T G G A C T A C G T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCAAATATTTGTT
TTATGCAAAT-------
 A C G T A C G T A C G T A C G T T A C G A G T C C G T A C G T A C G T A A G C T G T C A C A G T A C G T C G A T A C T G G A C T A C G T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCAAATATTTGTT
TATGTAAATAT-----
 A C G T A C G T A C G T T A C G A G T C C G T A C G T A C G T A A G C T G T C A C A G T A C G T C G A T A C T G G A C T A C G T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T