Information for 7-GTTGAATAGA (Motif 29)

A C T G A C G T A C G T A T C G C G T A C G T A A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C C G A T C G T A A C G T A C G T A T G C C G T A C G T A A G T C
p-value:1e-7
log p-value:-1.657e+01
Information Content per bp:1.941
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif14.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets32.7 +/- 30.2bp
Average Position of motif in Background48.7 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GTTGAATAGA--
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A T C G C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTTGAATAGA----
ACTATGAATGAATGAT
 A C G T A C G T A C T G A C G T A C G T A T C G C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTTGAATAGA
ATTTGAATT--
 A C G T A C T G A C G T A C G T A T C G C G T A C G T A A C G T C G T A A C T G C G T A
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTTGAATAGA---
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A T C G C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PH0026.1_Duxbl/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTTGAATAGA---
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A T C G C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTTGAATAGA
-TTTAAT---
 A C T G A C G T A C G T A T C G C G T A C G T A A C G T C G T A A C T G C G T A
A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTTGAATAGA----
NNATNAATTGTTTNN
 A C G T A C T G A C G T A C G T A T C G C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTTGAATAGA
NNTGTGGATTSS-
 A C G T A C G T A C G T A C T G A C G T A C G T A T C G C G T A C G T A A C G T C G T A A C T G C G T A
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTTGAATAGA----
ATGGTTCAATAATTTTG
 A C G T A C G T A C G T A C T G A C G T A C G T A T C G C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTTGAATAGA-
-ATGMATATDC
 A C T G A C G T A C G T A T C G C G T A C G T A A C G T C G T A A C T G C G T A A C G T
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C