Information for 14-AAAGACAAAGCCACCC (Motif 28)

C G T A T C G A C T G A T C A G G T C A T A G C C T G A T G C A T C G A A T C G G T A C A G T C C G T A G T A C T A G C G T A C
Reverse Opposite:
A C T G A C T G C A T G C G A T A C T G A C T G A T G C A G C T A C G T A G C T A T C G C A G T A G T C G A C T A G C T C G A T
p-value:1e-7
log p-value:-1.674e+01
Information Content per bp:1.650
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif106.1
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets48.4 +/- 22.0bp
Average Position of motif in Background47.7 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAAGACAAAGCCACCC
-AAAACAAAGG-----
 C G T A T C G A C T G A T C A G G T C A T A G C C T G A T G C A T C G A A T C G G T A C A G T C C G T A G T A C T A G C G T A C
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAAGACAAAGCCACCC
AAACAGACAAAGGAAT--
 A C G T A C G T C G T A T C G A C T G A T C A G G T C A T A G C C T G A T G C A T C G A A T C G G T A C A G T C C G T A G T A C T A G C G T A C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAAGACAAAGCCACCC
--GGACACACCCCC--
 C G T A T C G A C T G A T C A G G T C A T A G C C T G A T G C A T C G A A T C G G T A C A G T C C G T A G T A C T A G C G T A C
A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAAGACAAAGCCACCC
----ACAAAG------
 C G T A T C G A C T G A T C A G G T C A T A G C C T G A T G C A T C G A A T C G G T A C A G T C C G T A G T A C T A G C G T A C
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AAAGACAAAGCCACCC
----ACAAAGGNBCCT
 C G T A T C G A C T G A T C A G G T C A T A G C C T G A T G C A T C G A A T C G G T A C A G T C C G T A G T A C T A G C G T A C
A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAAGACAAAGCCACCC
-AAAACAATGG-----
 C G T A T C G A C T G A T C A G G T C A T A G C C T G A T G C A T C G A A T C G G T A C A G T C C G T A G T A C T A G C G T A C
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAAGACAAAGCCACCC
GGAAAGCGAAACCAAAAC
 A C G T A C G T C G T A T C G A C T G A T C A G G T C A T A G C C T G A T G C A T C G A A T C G G T A C A G T C C G T A G T A C T A G C G T A C
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

PB0167.1_Sox13_2/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AAAGACAAAGCCACCC-----
----ANNTNCCCACCCANNAC
 C G T A T C G A C T G A T C A G G T C A T A G C C T G A T G C A T C G A A T C G G T A C A G T C C G T A G T A C T A G C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AAAGACAAAGCCACCC
-VRRACAAWGG-----
 C G T A T C G A C T G A T C A G G T C A T A G C C T G A T G C A T C G A A T C G G T A C A G T C C G T A G T A C T A G C G T A C
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AAAGACAAAGCCACCC
-----CAAGGHCANV-
 C G T A T C G A C T G A T C A G G T C A T A G C C T G A T G C A T C G A A T C G G T A C A G T C C G T A G T A C T A G C G T A C
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T