Information for 6-GACAATGCCT (Motif 27)

A C T G C G T A G T A C G T C A T C G A C G A T A C T G T G A C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C G C T A A G C T A C G T A C T G C G A T T G A C
p-value:1e-8
log p-value:-1.875e+01
Information Content per bp:1.845
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.32%
Number of Background Sequences with motif176.6
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets53.1 +/- 24.8bp
Average Position of motif in Background49.2 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GACAATGCCT
GACAATGNN-
 A C T G C G T A G T A C G T C A T C G A C G A T A C T G T G A C A G T C A C G T
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GACAATGCCT
VRRACAAWGG--
 A C G T A C G T A C T G C G T A G T A C G T C A T C G A C G A T A C T G T G A C A G T C A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GACAATGCCT
-ACAAAG---
 A C T G C G T A G T A C G T C A T C G A C G A T A C T G T G A C A G T C A C G T
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GACAATGCCT
AAAACAATGG--
 A C G T A C G T A C T G C G T A G T A C G T C A T C G A C G A T A C T G T G A C A G T C A C G T
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GACAATGCCT
RAACAATGGN-
 A C G T A C T G C G T A G T A C G T C A T C G A C G A T A C T G T G A C A G T C A C G T
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GACAATGCCT
VRAACAATGG--
 A C G T A C G T A C T G C G T A G T A C G T C A T C G A C G A T A C T G T G A C A G T C A C G T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GACAATGCCT
RACAAWGG--
 A C T G C G T A G T A C G T C A T C G A C G A T A C T G T G A C A G T C A C G T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GACAATGCCT
RNAACAATGG--
 A C G T A C G T A C T G C G T A G T A C G T C A T C G A C G A T A C T G T G A C A G T C A C G T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GACAATGCCT---
-ACAAAGGNBCCT
 A C T G C G T A G T A C G T C A T C G A C G A T A C T G T G A C A G T C A C G T A C G T A C G T A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GACAATGCCT-
CTCACACAATGGCGC
 A C G T A C G T A C G T A C G T A C T G C G T A G T A C G T C A T C G A C G A T A C T G T G A C A G T C A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C