Information for 9-ATTACAATYAAAC (Motif 26)

G C T A G C A T G A C T G C T A G T A C G T C A T G C A G A C T G A T C T G C A T G C A C G T A T A G C
Reverse Opposite:
A C T G G C A T A C G T A C G T C T A G C T G A A C G T C A G T C A T G C G A T C T G A C G T A C G A T
p-value:1e-8
log p-value:-1.929e+01
Information Content per bp:1.582
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.7 +/- 26.1bp
Average Position of motif in Background39.0 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATTACAATYAAAC---
CTACCAATAAAATTCT
 G C T A G C A T G A C T G C T A G T A C G T C A T G C A G A C T G A T C T G C A T G C A C G T A T A G C A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATTACAATYAAAC----
AATGCAATAAAATTTAT
 G C T A G C A T G A C T G C T A G T A C G T C A T G C A G A C T G A T C T G C A T G C A C G T A T A G C A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

HOXB13/MA0901.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATTACAATYAAAC
---CCAATAAAAC
 G C T A G C A T G A C T G C T A G T A C G T C A T G C A G A C T G A T C T G C A T G C A C G T A T A G C
A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.63
Offset:6
Orientation:forward strand
Alignment:ATTACAATYAAAC
------ATTAAA-
 G C T A G C A T G A C T G C T A G T A C G T C A T G C A G A C T G A T C T G C A T G C A C G T A T A G C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATTACAATYAAAC-
ATAAACAATTAAACA
 A C G T G C T A G C A T G A C T G C T A G T A C G T C A T G C A G A C T G A T C T G C A T G C A C G T A T A G C A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ATTACAATYAAAC
---CCAATAAAAA
 G C T A G C A T G A C T G C T A G T A C G T C A T G C A G A C T G A T C T G C A T G C A C G T A T A G C
A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ATTACAATYAAAC
---CCAATCAA--
 G C T A G C A T G A C T G C T A G T A C G T C A T G C A G A C T G A T C T G C A T G C A C G T A T A G C
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATTACAATYAAAC
---CCAATAAAAA
 G C T A G C A T G A C T G C T A G T A C G T C A T G C A G A C T G A T C T G C A T G C A C G T A T A G C
A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

Hoxd9/MA0913.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATTACAATYAAAC
---GCAATAAAAA
 G C T A G C A T G A C T G C T A G T A C G T C A T G C A G A C T G A T C T G C A T G C A C G T A T A G C
A C G T A C G T A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATTACAATYAAAC
--NCYAATAAAA-
 G C T A G C A T G A C T G C T A G T A C G T C A T G C A G A C T G A T C T G C A T G C A C G T A T A G C
A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T