Information for 2-TGGATGTTCC (Motif 19)

C G A T C T A G T A C G C T G A C G A T A C T G A C G T C G A T A G T C A G T C
Reverse Opposite:
C T A G A C T G G C T A C G T A G T A C C G T A A G C T A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.221e+01
Information Content per bp:1.841
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif98.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets65.6 +/- 23.8bp
Average Position of motif in Background47.4 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TGGATGTTCC---
---CTGTTCCTGG
 C G A T C T A G T A C G C T G A C G A T A C T G A C G T C G A T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGGATGTTCC
GGGGATTTCC
 C G A T C T A G T A C G C T G A C G A T A C T G A C G T C G A T A G T C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGGATGTTCC
CGTGGGTGGTCC
 A C G T A C G T C G A T C T A G T A C G C T G A C G A T A C T G A C G T C G A T A G T C A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGGATGTTCC
GGGAATTTCC
 C G A T C T A G T A C G C T G A C G A T A C T G A C G T C G A T A G T C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGGATGTTCC
GGGAATTTCC
 C G A T C T A G T A C G C T G A C G A T A C T G A C G T C G A T A G T C A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGGATGTTCC-
-TKCTGTTCCA
 C G A T C T A G T A C G C T G A C G A T A C T G A C G T C G A T A G T C A G T C A C G T
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGGATGTTCC---
---ATTTTCCATT
 C G A T C T A G T A C G C T G A C G A T A C T G A C G T C G A T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGGATGTTCC
GGGGATTTCC
 C G A T C T A G T A C G C T G A C G A T A C T G A C G T C G A T A G T C A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TGGATGTTCC-
----TTTTCCA
 C G A T C T A G T A C G C T G A C G A T A C T G A C G T C G A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGGATGTTCC---
---ATTTTCCATT
 C G A T C T A G T A C G C T G A C G A T A C T G A C G T C G A T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T