Information for 1-TCATCATCAA (Motif 16)

A C G T A G T C C G T A A G C T A T G C C G T A A C G T A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T C T A G C G T A A C G T A T C G C T G A A C G T A C T G G T C A
p-value:1e-9
log p-value:-2.261e+01
Information Content per bp:1.915
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif48.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets54.9 +/- 26.9bp
Average Position of motif in Background51.1 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TCATCATCAA---
TATCATAATTAAGGA
 A C G T A C G T A C G T A G T C C G T A A G C T A T G C C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TCATCATCAA--
TAGTGATCATCATTA
 A C G T A C G T A C G T A C G T A G T C C G T A A G C T A T G C C G T A A C G T A G T C C G T A C G T A A C G T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TCATCATCAA-
-----ATTAAA
 A C G T A G T C C G T A A G C T A T G C C G T A A C G T A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

PH0016.1_Cux1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCATCATCAA-----
TNAGNTGATCAACCGGT
 A C G T A C G T A C G T A G T C C G T A A G C T A T G C C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T

PH0150.1_Pou4f3/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCATCATCAA-----
GACNTCATTAATAANN
 A C G T A C G T A G T C C G T A A G C T A T G C C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCATCATCAA--
--GTCGTAAAAT
 A C G T A G T C C G T A A G C T A T G C C G T A A C G T A G T C C G T A C G T A A C G T A C G T
A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCATCATCAA-------
-GAAGATCAATCACTTA
 A C G T A G T C C G T A A G C T A T G C C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCATCATCAA-------
TATAGATCAAAGGAAAA
 A C G T A G T C C G T A A G C T A T G C C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCATCATCAA
ATTGCATCAT---
 A C G T A C G T A C G T A C G T A G T C C G T A A G C T A T G C C G T A A C G T A G T C C G T A C G T A
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCATCATCAA
ATGACATCATCNN
 A C G T A C G T A C G T A C G T A G T C C G T A A G C T A T G C C G T A A C G T A G T C C G T A C G T A
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T