Information for 3-GAAAAGGCTA (Motif 9)

A C T G C G T A G T C A C G T A C G T A A C T G A C T G G A T C C G A T C T G A
Reverse Opposite:
A G C T C G T A C T A G G T A C A G T C A C G T A C G T A C G T A C G T A G T C
p-value:1e-7
log p-value:-1.820e+01
Information Content per bp:1.874
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif4.52%
Number of Background Sequences with motif109.6
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets47.2 +/- 24.3bp
Average Position of motif in Background47.9 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAGGCTA
ANGNAAAGGTCA
 A C G T A C G T A C T G C G T A G T C A C G T A C G T A A C T G A C T G G A T C C G A T C T G A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

HLTF/MA0109.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAAAAGGCTA
NNATAAGGNN-
 A C G T A C T G C G T A G T C A C G T A C G T A A C T G A C T G G A T C C G A T C T G A
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAAAAGGCTA
CAGATAAGGN--
 A C G T A C G T A C T G C G T A G T C A C G T A C G T A A C T G A C T G G A T C C G A T C T G A
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAGGCTA
TGGAAAA-----
 A C G T A C G T A C T G C G T A G T C A C G T A C G T A A C T G A C T G G A T C C G A T C T G A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAAAAGGCTA
NVAGATAAGR---
 A C G T A C G T A C G T A C T G C G T A G T C A C G T A C G T A A C T G A C T G G A T C C G A T C T G A
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GAAAAGGCTA----
---AAGGATATNTN
 A C T G C G T A G T C A C G T A C G T A A C T G A C T G G A T C C G A T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAGGCTA
NAGATAAGNN--
 A C G T A C G T A C T G C G T A G T C A C G T A C G T A A C T G A C T G G A T C C G A T C T G A
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GAAAAGGCTA-
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T C A C G T A C G T A A C T G A C T G G A T C C G A T C T G A A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GAAAAGGCTA
NBWGATAAGR---
 A C G T A C G T A C G T A C T G C G T A G T C A C G T A C G T A A C T G A C T G G A T C C G A T C T G A
T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GAAAAGGCTA
NNGAGATAAGA---
 A C G T A C G T A C G T A C G T A C T G C G T A G T C A C G T A C G T A A C T G A C T G G A T C C G A T C T G A
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T